Information for 5-CTTGTTTCCCTCCGGC (Motif 19)

A G T C A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A C G T A C G T A A G T C C G T A C G T A A C T G
p-value:1e-8
log p-value:-1.924e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 27.5bp
Average Position of motif in Background64.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTTGTTTCCCTCCGGC---
----NTCCCCTCAGGGANT
 A G T C A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTTGTTTCCCTCCGGC---
----NTCGCCTCAGGCAAT
 A G T C A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTTGTTTCCCTCCGGC---
----NTNGCCTCAGGCNNN
 A G T C A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTGTTTCCCTCCGGC
SCHTGTTTACAT-----
 A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTTGTTTCCCTCCGGC
---NYTTCCCGCC---
 A G T C A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C
A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CTTGTTTCCCTCCGGC
-----TTCCCGCCWG-
 A G T C A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTTGTTTCCCTCCGGC
----ATGCCCTGAGGC
 A G T C A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C
A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTTGTTTCCCTCCGGC
---NCTTCCCGCCC--
 A G T C A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C
A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTTGTTTCCCTCCGGC---
----ATTGCCTCAGGCAAT
 A G T C A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTTGTTTCCCTCCGGC
----WTGSCCTSAGGS
 A G T C A C G T A C G T A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C
A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C