Information for 7-ACGCTATAAG (Motif 17)

T C G A T A G C A C T G A G T C C G A T T G C A A C G T T G C A C T G A C T A G
Reverse Opposite:
G A T C A G C T A C G T T G C A A C G T C G T A T C A G T G A C A T C G A G C T
p-value:1e-8
log p-value:-2.058e+01
Information Content per bp:1.683
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif308.9
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets51.6 +/- 25.2bp
Average Position of motif in Background50.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACGCTATAAG----
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T T C G A T A G C A C T G A G T C C G A T T G C A A C G T T G C A C T G A C T A G A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACGCTATAAG----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T T C G A T A G C A C T G A G T C C G A T T G C A A C G T T G C A C T G A C T A G A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACGCTATAAG----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T T C G A T A G C A C T G A G T C C G A T T G C A A C G T T G C A C T G A C T A G A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACGCTATAAG--------
---GTATAAAAGGCGGGG
 T C G A T A G C A C T G A G T C C G A T T G C A A C G T T G C A C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACGCTATAAG----
--GCTATAAATAGC
 T C G A T A G C A C T G A G T C C G A T T G C A A C G T T G C A C T G A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACGCTATAAG-
GNCTATAAAAGG
 A C G T T C G A T A G C A C T G A G T C C G A T T G C A A C G T T G C A C T G A C T A G A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACGCTATAAG--------
---GTATAAAAGGCGGGG
 T C G A T A G C A C T G A G T C C G A T T G C A A C G T T G C A C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACGCTATAAG----
--TCTAAAAATAGA
 T C G A T A G C A C T G A G T C C G A T T G C A A C G T T G C A C T G A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACGCTATAAG----
--ACTATAAATAGA
 T C G A T A G C A C T G A G T C C G A T T G C A A C G T T G C A C T G A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACGCTATAAG-
AAGCCATAAAA
 T C G A T A G C A C T G A G T C C G A T T G C A A C G T T G C A C T G A C T A G A C G T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A