Information for 4-TGGAGGGGTTCAAAGG (Motif 16)

A G C T C T A G A C T G C G T A A T C G A C T G A C T G A T C G G C A T C G A T A G T C C G T A C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C G T A C T G G C T A C G T A A T G C A G T C A G T C A T G C A C G T A G T C A G T C C T G A
p-value:1e-9
log p-value:-2.142e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.4 +/- 13.4bp
Average Position of motif in Background37.4 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRB/MA0855.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TGGAGGGGTTCAAAGG---
-----GGGGTCAAAGGTCA
 A G C T C T A G A C T G C G T A A T C G A C T G A C T G A T C G G C A T C G A T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TGGAGGGGTTCAAAGG---
-----GGGGTCAAAGGTCA
 A G C T C T A G A C T G C G T A A T C G A C T G A C T G A T C G G C A T C G A T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TGGAGGGGTTCAAAGG---
-----GGGGTCAAAGGTCA
 A G C T C T A G A C T G C G T A A T C G A C T G A C T G A T C G G C A T C G A T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TGGAGGGGTTCAAAGG
------ACATCAAAGG
 A G C T C T A G A C T G C G T A A T C G A C T G A C T G A T C G G C A T C G A T A G T C C G T A C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGGAGGGGTTCAAAGG--
----AAAGATCAAAGGAA
 A G C T C T A G A C T G C G T A A T C G A C T G A C T G A T C G G C A T C G A T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TGGAGGGGTTCAAAGG--
------ACATCAAAGGNA
 A G C T C T A G A C T G C G T A A T C G A C T G A C T G A T C G G C A T C G A T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGGAGGGGTTCAAAGG
----CGGTTTCAAA--
 A G C T C T A G A C T G C G T A A T C G A C T G A C T G A T C G G C A T C G A T A G T C C G T A C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGGAGGGGTTCAAAGG---
----AGAGTCCAAAGTCCA
 A G C T C T A G A C T G C G T A A T C G A C T G A C T G A T C G G C A T C G A T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TGGAGGGGTTCAAAGG
------ACWTCAAAGG
 A G C T C T A G A C T G C G T A A T C G A C T G A C T G A T C G G C A T C G A T A G T C C G T A C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGGAGGGGTTCAAAGG---
----AGGGGTCAGAGGTCA
 A G C T C T A G A C T G C G T A A T C G A C T G A C T G A T C G G C A T C G A T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A