Information for 2-CGGGVCTGCT (Motif 10)

T A G C C T A G A C T G C A T G T G A C T A G C G C A T T C A G T G A C A C G T
Reverse Opposite:
T G C A A C T G A G T C C G T A A T C G A C T G G T A C T G A C G A T C A T C G
p-value:1e-10
log p-value:-2.471e+01
Information Content per bp:1.600
Number of Target Sequences with motif123.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif3616.7
Percentage of Background Sequences with motif7.61%
Average Position of motif in Targets49.0 +/- 26.7bp
Average Position of motif in Background50.4 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGGGVCTGCT-----
TACGAGACTCCTCTAAC
 A C G T A C G T T A G C C T A G A C T G C A T G T G A C T A G C G C A T T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGGVCTGCT------
-TNTCCTGCTGTGNNG
 T A G C C T A G A C T G C A T G T G A C T A G C G C A T T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGGVCTGCT
CGCAGCTGCG
 T A G C C T A G A C T G C A T G T G A C T A G C G C A T T C A G T G A C A C G T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGGVCTGCT------
-NNTCCTGCTGTGNNN
 T A G C C T A G A C T G C A T G T G A C T A G C G C A T T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CGGGVCTGCT-
------NGCTN
 T A G C C T A G A C T G C A T G T G A C T A G C G C A T T C A G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGGGVCTGCT----
----CCTGCTGAGH
 T A G C C T A G A C T G C A T G T G A C T A G C G C A T T C A G T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL002.1_INR/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGGVCTGCT
-NNNANTGA-
 T A G C C T A G A C T G C A T G T G A C T A G C G C A T T C A G T G A C A C G T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGGGVCTGCT
CNAGGCCT---
 A C G T T A G C C T A G A C T G C A T G T G A C T A G C G C A T T C A G T G A C A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGGGVCTGCT---
GGNGCGNCTGTTNNN
 A C G T A C G T T A G C C T A G A C T G C A T G T G A C T A G C G C A T T C A G T G A C A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGGGVCTGCT---
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T T A G C C T A G A C T G C A T G T G A C T A G C G C A T T C A G T G A C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T