Information for 3-TTACTRKTTKMYRACC (Motif 12)

A C G T A C G T C G T A A T G C A C G T C T G A A C T G A C G T A C G T A C G T G T C A A G T C C T G A C G T A A G T C A G T C
Reverse Opposite:
A C T G C T A G A C G T A G C T C T A G A C G T G T C A C G T A C G T A G T A C A G C T C G T A A T C G A C G T G T C A C G T A
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.847
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 27.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTACTRKTTKMYRACC---
---NNNTTTTACGACNTTN
 A C G T A C G T C G T A A T G C A C G T C T G A A C T G A C G T A C G T A C G T G T C A A G T C C T G A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0076.1_Hoxd11/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTACTRKTTKMYRACC---
--ANNATTTTACGACNTNA
 A C G T A C G T C G T A A T G C A C G T C T G A A C T G A C G T A C G T A C G T G T C A A G T C C T G A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTACTRKTTKMYRACC
-----NTTTTACGACC
 A C G T A C G T C G T A A T G C A C G T C T G A A C T G A C G T A C G T A C G T G T C A A G T C C T G A C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

PH0077.1_Hoxd12/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTACTRKTTKMYRACC---
--NNNATTTTACGACNNTN
 A C G T A C G T C G T A A T G C A C G T C T G A A C T G A C G T A C G T A C G T G T C A A G T C C T G A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TTACTRKTTKMYRACC
-----NTTTTACGACC
 A C G T A C G T C G T A A T G C A C G T C T G A A C T G A C G T A C G T A C G T G T C A A G T C C T G A C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

PH0047.1_Hoxa11/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTACTRKTTKMYRACC---
---NNGTTTTACGACTTTA
 A C G T A C G T C G T A A T G C A C G T C T G A A C T G A C G T A C G T A C G T G T C A A G T C C T G A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTACTRKTTKMYRACC---
---ANNTTTTACGACNTNN
 A C G T A C G T C G T A A T G C A C G T C T G A A C T G A C G T A C G T A C G T G T C A A G T C C T G A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTACTRKTTKMYRACC---
--GNNNTTTTACGACCTNA
 A C G T A C G T C G T A A T G C A C G T C T G A A C T G A C G T A C G T A C G T G T C A A G T C C T G A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTACTRKTTKMYRACC
----ANTTTTACGACC
 A C G T A C G T C G T A A T G C A C G T C T G A A C T G A C G T A C G T A C G T G T C A A G T C C T G A C G T A A G T C A G T C
A C G T A C G T A C G T A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TTACTRKTTKMYRACC
-----NTTTTACGACT
 A C G T A C G T C G T A A T G C A C G T C T G A A C T G A C G T A C G T A C G T G T C A A G T C C T G A C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T