Information for 6-TGCAGGAATAGAC (Motif 11)

A C G T A C T G A T G C C G T A A C T G A C T G C G T A C G T A A C G T C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C G T A C G A T A C G T A G T C A G T C A C G T A T C G A G T C G T C A
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 21.6bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGCAGGAATAGAC
----GGATTAGC-
 A C G T A C T G A T G C C G T A A C T G A C T G C G T A C G T A A C G T C G T A A C T G C G T A A G T C
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGCAGGAATAGAC
--VRGGATTARN-
 A C G T A C T G A T G C C G T A A C T G A C T G C G T A C G T A A C G T C G T A A C T G C G T A A G T C
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGCAGGAATAGAC
---RGGATTAR--
 A C G T A C T G A T G C C G T A A C T G A C T G C G T A C G T A A C G T C G T A A C T G C G T A A G T C
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGCAGGAATAGAC
---NGGATTAA--
 A C G T A C T G A T G C C G T A A C T G A C T G C G T A C G T A A C G T C G T A A C T G C G T A A G T C
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGCAGGAATAGAC
---TGGAACAGMA
 A C G T A C T G A T G C C G T A A C T G A C T G C G T A C G T A A C G T C G T A A C T G C G T A A G T C
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCAGGAATAGAC
---GGGATTAA--
 A C G T A C T G A T G C C G T A A C T G A C T G C G T A C G T A A C G T C G T A A C T G C G T A A G T C
A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCAGGAATAGAC
--GNGGATTAGN-
 A C G T A C T G A T G C C G T A A C T G A C T G C G T A C G T A A C G T C G T A A C T G C G T A A G T C
A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGCAGGAATAGAC
---CGGATTAN--
 A C G T A C T G A T G C C G T A A C T G A C T G C G T A C G T A A C G T C G T A A C T G C G T A A G T C
A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGCAGGAATAGAC
---GGGATTANN-
 A C G T A C T G A T G C C G T A A C T G A C T G C G T A C G T A A C G T C G T A A C T G C G T A A G T C
A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCAGGAATAGAC
AAGAGGATTAG--
 A C G T A C T G A T G C C G T A A C T G A C T G C G T A C G T A A C G T C G T A A C T G C G T A A G T C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T