Information for 1-CCDGGATGGCGCGGGG (Motif 3)

A G T C A G T C C A T G A C T G C T A G C G T A A C G T C T A G A T C G A G T C A C T G A T G C A T C G A T C G A C T G A C T G
Reverse Opposite:
A G T C G T A C A T G C T A G C A T C G A G T C A C T G A T G C A G T C G T C A C G A T A G T C A G T C G T A C C T A G A C T G
p-value:1e-9
log p-value:-2.241e+01
Information Content per bp:1.782
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 28.6bp
Average Position of motif in Background76.9 +/- 1.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCDGGATGGCGCGGGG--
-NAGANTGGCGGGGNGNA
 A G T C A G T C C A T G A C T G C T A G C G T A A C G T C T A G A T C G A G T C A C T G A T G C A T C G A T C G A C T G A C T G A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CCDGGATGGCGCGGGG
-------GGCGCGCT-
 A G T C A G T C C A T G A C T G C T A G C G T A A C G T C T A G A T C G A G T C A C T G A T G C A T C G A T C G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCDGGATGGCGCGGGG--
-NNNNTTGGCGCCGANNN
 A G T C A G T C C A T G A C T G C T A G C G T A A C G T C T A G A T C G A G T C A C T G A T G C A T C G A T C G A C T G A C T G A C G T A C G T
A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCDGGATGGCGCGGGG--
-NNNNTTGGCGCCGANNN
 A G T C A G T C C A T G A C T G C T A G C G T A A C G T C T A G A T C G A G T C A C T G A T G C A T C G A T C G A C T G A C T G A C G T A C G T
A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCDGGATGGCGCGGGG
-CAAGATGGCGGC---
 A G T C A G T C C A T G A C T G C T A G C G T A A C G T C T A G A T C G A G T C A C T G A T G C A T C G A T C G A C T G A C T G
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCDGGATGGCGCGGGG-----
----ANTNCCGGGGGGAANTT
 A G T C A G T C C A T G A C T G C T A G C G T A A C G T C T A G A T C G A G T C A C T G A T G C A T C G A T C G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CCDGGATGGCGCGGGG--
------TGCCCNGGGGCA
 A G T C A G T C C A T G A C T G C T A G C G T A A C G T C T A G A T C G A G T C A C T G A T G C A T C G A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CCDGGATGGCGCGGGG-
--ATAAGGGCGCGCGAT
 A G T C A G T C C A T G A C T G C T A G C G T A A C G T C T A G A T C G A G T C A C T G A T G C A T C G A T C G A C T G A C T G A C G T
A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCDGGATGGCGCGGGG
---TAATGGCGGNC--
 A G T C A G T C C A T G A C T G C T A G C G T A A C G T C T A G A T C G A G T C A C T G A T G C A T C G A T C G A C T G A C T G
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CCDGGATGGCGCGGGG-
--ATAAAGGCGCGCGAT
 A G T C A G T C C A T G A C T G C T A G C G T A A C G T C T A G A T C G A G T C A C T G A T G C A T C G A T C G A C T G A C T G A C G T
A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T