Information for 1-ATAATTTRGTGAC (Motif 2)

C G T A C G A T G T C A G T C A C G A T A G C T A G C T C T A G A C T G C G A T T A C G T G C A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A G T A C A G T C T C G A C T G A C G T A C A G T A C G T G C T A A C G T
p-value:1e-10
log p-value:-2.353e+01
Information Content per bp:1.706
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif151.9
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets62.7 +/- 25.9bp
Average Position of motif in Background49.0 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dlx1/MA0879.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATAATTTRGTGAC
NNTAATTANN----
 A C G T C G T A C G A T G T C A G T C A C G A T A G C T A G C T C T A G A C T G C G A T T A C G T G C A A G T C
T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATAATTTRGTGAC
AATAATT-------
 A C G T C G T A C G A T G T C A G T C A C G A T A G C T A G C T C T A G A C T G C G A T T A C G T G C A A G T C
G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATAATTTRGTGAC
TATCATAATTAAGGA--
 A C G T A C G T A C G T A C G T C G T A C G A T G T C A G T C A C G A T A G C T A G C T C T A G A C T G C G A T T A C G T G C A A G T C
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------ATAATTTRGTGAC
NNCNNAACAATTNT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G T C A G T C A C G A T A G C T A G C T C T A G A C T G C G A T T A C G T G C A A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATAATTTRGTGAC-----
-AAATTTGCTGACTTAGA
 C G T A C G A T G T C A G T C A C G A T A G C T A G C T C T A G A C T G C G A T T A C G T G C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------ATAATTTRGTGAC
TNCNNAACAATTTTTNC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G T C A G T C A C G A T A G C T A G C T C T A G A C T G C G A T T A C G T G C A A G T C
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T A C G T

VSX1/MA0725.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATAATTTRGTGAC
NTAATTAG-----
 C G T A C G A T G T C A G T C A C G A T A G C T A G C T C T A G A C T G C G A T T A C G T G C A A G T C
T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T A C G T A C G T A C G T A C G T

PH0132.1_Pax6/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATAATTTRGTGAC
TGATTAATTAATTGAC
 A C G T A C G T A C G T C G T A C G A T G T C A G T C A C G A T A G C T A G C T C T A G A C T G C G A T T A C G T G C A A G T C
A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATAATTTRGTGAC---
NAATTTTATTACCNNN
 C G T A C G A T G T C A G T C A C G A T A G C T A G C T C T A G A C T G C G A T T A C G T G C A A G T C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PH0143.1_Pou2f1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ATAATTTRGTGAC
ATATATTAATTAAGTA--
 A C G T A C G T A C G T A C G T A C G T C G T A C G A T G T C A G T C A C G A T A G C T A G C T C T A G A C T G C G A T T A C G T G C A A G T C
C T G A G A C T C T A G G C A T C T G A G C A T G C A T G T C A C G T A C G A T A C G T G C T A C T G A A C T G G C A T C G T A A C G T A C G T