Information for 4-CAGAGGGTGCCAAGVG (Motif 8)

A G T C C G T A A C T G C T G A C T A G C T A G T A C G C G A T C T A G T A G C A G T C C T G A G C T A T C A G T G C A A C T G
Reverse Opposite:
G T A C A C G T A G T C C A G T G A C T C T A G A C T G A G T C C G T A A T G C A G T C G A T C A G C T A G T C G A C T C T A G
p-value:1e-9
log p-value:-2.247e+01
Information Content per bp:1.659
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif103.7
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets49.4 +/- 21.4bp
Average Position of motif in Background52.3 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGAGGGTGCCAAGVG
-----GGTGCCAAGT-
 A G T C C G T A A C T G C T G A C T A G C T A G T A C G C G A T C T A G T A G C A G T C C T G A G C T A T C A G T G C A A C T G
A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGGTGCCAAGVG
AACAGATGGT--------
 A C G T A C G T A G T C C G T A A C T G C T G A C T A G C T A G T A C G C G A T C T A G T A G C A G T C C T G A G C T A T C A G T G C A A C T G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGAGGGTGCCAAGVG
GCTGGGGGGTACCCCTT-
 A C G T A C G T A G T C C G T A A C T G C T G A C T A G C T A G T A C G C G A T C T A G T A G C A G T C C T G A G C T A T C A G T G C A A C T G
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CAGAGGGTGCCAAGVG
------TTGCCAAG--
 A G T C C G T A A C T G C T G A C T A G C T A G T A C G C G A T C T A G T A G C A G T C C T G A G C T A T C A G T G C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGGTGCCAAGVG
AACAGATGGC--------
 A C G T A C G T A G T C C G T A A C T G C T G A C T A G C T A G T A C G C G A T C T A G T A G C A G T C C T G A G C T A T C A G T G C A A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CAGAGGGTGCCAAGVG
GCCASCAGGGGGCGCYVNNG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C T G A C T A G C T A G T A C G C G A T C T A G T A G C A G T C C T G A G C T A T C A G T G C A A C T G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CAGAGGGTGCCAAGVG
-----CGTGCCAAG--
 A G T C C G T A A C T G C T G A C T A G C T A G T A C G C G A T C T A G T A G C A G T C C T G A G C T A T C A G T G C A A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CAGAGGGTGCCAAGVG
TGTCAGGGGGCG-------
 A C G T A C G T A C G T A G T C C G T A A C T G C T G A C T A G C T A G T A C G C G A T C T A G T A G C A G T C C T G A G C T A T C A G T G C A A C T G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CAGAGGGTGCCAAGVG
TGGCCACCAGGGGGCGCTA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C T G A C T A G C T A G T A C G C G A T C T A G T A G C A G T C C T G A G C T A T C A G T G C A A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CAGAGGGTGCCAAGVG
AAGGCCAGATGGTCCGG----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C T G A C T A G C T A G T A C G C G A T C T A G T A G C A G T C C T G A G C T A T C A G T G C A A C T G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T A C G T A C G T A C G T