Information for 2-WCCACNAGGTGGCAGC (Motif 5)

C G T A A G T C A G T C T G C A A T G C C G A T C G T A A T C G T A C G C A G T T A C G A C T G G T A C C G T A A T C G A G T C
Reverse Opposite:
C T A G A T G C G A C T A C T G T G A C A G T C G T C A A T G C A T G C G C A T C G T A A T C G A C G T C T A G A C T G C G A T
p-value:1e-11
log p-value:-2.697e+01
Information Content per bp:1.686
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif134.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets54.2 +/- 20.2bp
Average Position of motif in Background51.2 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--WCCACNAGGTGGCAGC--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T C G T A A G T C A G T C T G C A A T G C C G A T C G T A A T C G T A C G C A G T T A C G A C T G G T A C C G T A A T C G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--WCCACNAGGTGGCAGC-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T C G T A A G T C A G T C T G C A A T G C C G A T C G T A A T C G T A C G C A G T T A C G A C T G G T A C C G T A A T C G A G T C A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:WCCACNAGGTGGCAGC----
GCCASCAGGGGGCGCYVNNG
 C G T A A G T C A G T C T G C A A T G C C G A T C G T A A T C G T A C G C A G T T A C G A C T G G T A C C G T A A T C G A G T C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:WCCACNAGGTGGCAGC
----CAAGATGGCGGC
 C G T A A G T C A G T C T G C A A T G C C G A T C G T A A T C G T A C G C A G T T A C G A C T G G T A C C G T A A T C G A G T C
A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:WCCACNAGGTGGCAGC
----CAAGATGGCGGC
 C G T A A G T C A G T C T G C A A T G C C G A T C G T A A T C G T A C G C A G T T A C G A C T G G T A C C G T A A T C G A G T C
A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:WCCACNAGGTGGCAGC
------GGTTGGCAT-
 C G T A A G T C A G T C T G C A A T G C C G A T C G T A A T C G T A C G C A G T T A C G A C T G G T A C C G T A A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-WCCACNAGGTGGCAGC
CACCCCCGGGGGGG---
 A C G T C G T A A G T C A G T C T G C A A T G C C G A T C G T A A T C G T A C G C A G T T A C G A C T G G T A C C G T A A T C G A G T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:WCCACNAGGTGGCAGC
------AGGTGTCA--
 C G T A A G T C A G T C T G C A A T G C C G A T C G T A A T C G T A C G C A G T T A C G A C T G G T A C C G T A A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--WCCACNAGGTGGCAGC
GCACCCCTGGGTGCC---
 A C G T A C G T C G T A A G T C A G T C T G C A A T G C C G A T C G T A A T C G T A C G C A G T T A C G A C T G G T A C C G T A A T C G A G T C
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:WCCACNAGGTGGCAGC
---AACAGATGGC---
 C G T A A G T C A G T C T G C A A T G C C G A T C G T A A T C G T A C G C A G T T A C G A C T G G T A C C G T A A T C G A G T C
A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T