Information for 2-TTSCTTCCCAGCC (Motif 4)

A G C T A G C T A T G C A G T C A C G T A C G T A T G C T G A C A G T C C T G A T A C G A T G C A G T C
Reverse Opposite:
A C T G A T C G A T G C A G C T C T A G A C T G T A C G T G C A G T C A T C A G A T C G T C G A T C G A
p-value:1e-12
log p-value:-2.915e+01
Information Content per bp:1.706
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif134.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets53.9 +/- 28.6bp
Average Position of motif in Background44.8 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TTSCTTCCCAGCC-
----TGCCCAGNHW
 A G C T A G C T A T G C A G T C A C G T A C G T A T G C T G A C A G T C C T G A T A C G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TTSCTTCCCAGCC-------
-----TCCCAGMCRAGCCCC
 A G C T A G C T A T G C A G T C A C G T A C G T A T G C T G A C A G T C C T G A T A C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTSCTTCCCAGCC
--HTTTCCCASG-
 A G C T A G C T A T G C A G T C A C G T A C G T A T G C T G A C A G T C C T G A T A C G A T G C A G T C
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TTSCTTCCCAGCC--
-------BCAGACWA
 A G C T A G C T A T G C A G T C A C G T A C G T A T G C T G A C A G T C C T G A T A C G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTSCTTCCCAGCC
--NCTTCCCGCCC
 A G C T A G C T A T G C A G T C A C G T A C G T A T G C T G A C A G T C C T G A T A C G A T G C A G T C
A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTSCTTCCCAGCC-----
-ANNTNCCCACCCANNAC
 A G C T A G C T A T G C A G T C A C G T A C G T A T G C T G A C A G T C C T G A T A C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.57
Offset:8
Orientation:forward strand
Alignment:TTSCTTCCCAGCC
--------CAGCC
 A G C T A G C T A T G C A G T C A C G T A C G T A T G C T G A C A G T C C T G A T A C G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TTSCTTCCCAGCC
------CACAGN-
 A G C T A G C T A T G C A G T C A C G T A C G T A T G C T G A C A G T C C T G A T A C G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTSCTTCCCAGCC----
-ACTATGCCAACCTACC
 A G C T A G C T A T G C A G T C A C G T A C G T A T G C T G A C A G T C C T G A T A C G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTSCTTCCCAGCC-
----TTMACACCTT
 A G C T A G C T A T G C A G T C A C G T A C G T A T G C T G A C A G T C C T G A T A C G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T