Information for 1-TKTTTTRCAATATTAA (Motif 3)

C G A T C A T G A C G T A C G T A G C T A C G T C T A G A G T C C G T A C T G A C G A T C G T A A C G T G A C T C G T A C G T A
Reverse Opposite:
C G A T A C G T C G T A C G T A A C G T C G T A A G C T A C G T C T A G G A T C G T C A C T G A G T C A G T C A G T A C C G T A
p-value:1e-13
log p-value:-3.064e+01
Information Content per bp:1.758
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 12.3bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TKTTTTRCAATATTAA
--NNTNNCAATATTAG
 C G A T C A T G A C G T A C G T A G C T A C G T C T A G A G T C C G T A C T G A C G A T C G T A A C G T G A C T C G T A C G T A
A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TKTTTTRCAATATTAA
--NNTNNCAATATTAG
 C G A T C A T G A C G T A C G T A G C T A C G T C T A G A G T C C G T A C T G A C G A T C G T A A C G T G A C T C G T A C G T A
A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TKTTTTRCAATATTAA
ANATTTTTGCAANTN---
 A C G T A C G T C G A T C A T G A C G T A C G T A G C T A C G T C T A G A G T C C G T A C T G A C G A T C G T A A C G T G A C T C G T A C G T A
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TKTTTTRCAATATTAA
TCTTTANTAATANN--
 C G A T C A T G A C G T A C G T A G C T A C G T C T A G A G T C C G T A C T G A C G A T C G T A A C G T G A C T C G T A C G T A
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.59
Offset:11
Orientation:forward strand
Alignment:TKTTTTRCAATATTAA-
-----------ATTAAA
 C G A T C A T G A C G T A C G T A G C T A C G T C T A G A G T C C G T A C T G A C G A T C G T A A C G T G A C T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TKTTTTRCAATATTAA
NATTGTGCAAT-----
 C G A T C A T G A C G T A C G T A G C T A C G T C T A G A G T C C G T A C T G A C G A T C G T A A C G T G A C T C G T A C G T A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.58
Offset:9
Orientation:forward strand
Alignment:TKTTTTRCAATATTAA----
---------ATATTAATTAA
 C G A T C A T G A C G T A C G T A G C T A C G T C T A G A G T C C G T A C T G A C G A T C G T A A C G T G A C T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TKTTTTRCAATATTAA--
---CTTTCANTATGACTV
 C G A T C A T G A C G T A C G T A G C T A C G T C T A G A G T C C G T A C T G A C G A T C G T A A C G T G A C T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

POU4F3/MA0791.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TKTTTTRCAATATTAA----
----ATGCATAATTAATGAG
 C G A T C A T G A C G T A C G T A G C T A C G T C T A G A G T C C G T A C T G A C G A T C G T A A C G T G A C T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

POU4F1/MA0790.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TKTTTTRCAATATTAA--
----ATGAATAATTAATG
 C G A T C A T G A C G T A C G T A G C T A C G T C T A G A G T C C G T A C T G A C G A T C G T A A C G T G A C T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G