Information for 5-AGGAGATAAATGGGGT (Motif 15)

T G C A C A T G T A C G G C T A C T A G C G T A G A C T G C T A C G T A C G T A G A C T C T A G A C T G C A T G A C T G G A C T
Reverse Opposite:
C T G A G T A C G A T C T G A C A G T C C T G A A C G T A C G T C G A T C T G A G A C T G A T C C A G T A T G C G T A C A C G T
p-value:1e-7
log p-value:-1.758e+01
Information Content per bp:1.691
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.3 +/- 22.8bp
Average Position of motif in Background51.3 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:AGGAGATAAATGGGGT
----GCTAAACGGT--
 T G C A C A T G T A C G G C T A C T A G C G T A G A C T G C T A C G T A C G T A G A C T C T A G A C T G C A T G A C T G G A C T
A C G T A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGGAGATAAATGGGGT
-AAAGATCAAAGGGTT
 T G C A C A T G T A C G G C T A C T A G C G T A G A C T G C T A C G T A C G T A G A C T C T A G A C T G C A T G A C T G G A C T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGGAGATAAATGGGGT
----GCTAATTGCT--
 T G C A C A T G T A C G G C T A C T A G C G T A G A C T G C T A C G T A C G T A G A C T C T A G A C T G C A T G A C T G G A C T
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGGAGATAAATGGGGT
-----NNATAAGGNN-
 T G C A C A T G T A C G G C T A C T A G C G T A G A C T G C T A C G T A C G T A G A C T C T A G A C T G C A T G A C T G G A C T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGAGATAAATGGGGT-
NANAGATCAAAGGGNNN
 T G C A C A T G T A C G G C T A C T A G C G T A G A C T G C T A C G T A C G T A G A C T C T A G A C T G C A T G A C T G G A C T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGAGATAAATGGGGT
---TGATTGATGA---
 T G C A C A T G T A C G G C T A C T A G C G T A G A C T G C T A C G T A C G T A G A C T C T A G A C T G C A T G A C T G G A C T
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGGAGATAAATGGGGT
---TGATTRATGGCY-
 T G C A C A T G T A C G G C T A C T A G C G T A G A C T G C T A C G T A C G T A G A C T C T A G A C T G C A T G A C T G G A C T
A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGGAGATAAATGGGGT
-GNCTATAAAAGG---
 T G C A C A T G T A C G G C T A C T A G C G T A G A C T G C T A C G T A C G T A G A C T C T A G A C T G C A T G A C T G G A C T
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGAGATAAATGGGGT
---ACATCAAAGGNA-
 T G C A C A T G T A C G G C T A C T A G C G T A G A C T G C T A C G T A C G T A G A C T C T A G A C T G C A T G A C T G G A C T
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGAGATAAATGGGGT
-AAAGATCAAAGGAA-
 T G C A C A T G T A C G G C T A C T A G C G T A G A C T G C T A C G T A C G T A G A C T C T A G A C T G C A T G A C T G G A C T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T