Information for 5-CTGTCTCTCCTTC (Motif 12)

A T G C A G C T C T A G C G A T A G T C A C G T A T G C A C G T A G T C A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G C T A G C G T A A T C G C G T A A C T G C G T A A G T C C T G A A T C G
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.843
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.1 +/- 29.4bp
Average Position of motif in Background54.8 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:8
Orientation:forward strand
Alignment:CTGTCTCTCCTTC-
--------GCTTCC
 A T G C A G C T C T A G C G A T A G T C A C G T A T G C A C G T A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTCTCCTTC-
CTTATCTCHMCATCT
 A C G T A T G C A G C T C T A G C G A T A G T C A C G T A T G C A C G T A G T C A G T C A C G T A C G T A G T C A C G T
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTGTCTCTCCTTC-
----CNGTCCTCCC
 A T G C A G C T C T A G C G A T A G T C A C G T A T G C A C G T A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTGTCTCTCCTTC
----GTGACCTT-
 A T G C A G C T C T A G C G A T A G T C A C G T A T G C A C G T A G T C A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTCTCCTTC-
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A C G T A C G T A T G C A G C T C T A G C G A T A G T C A C G T A T G C A C G T A G T C A G T C A C G T A C G T A G T C A C G T
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTGTCTCTCCTTC-
--GSCTGTCACTCA
 A T G C A G C T C T A G C G A T A G T C A C G T A T G C A C G T A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CTGTCTCTCCTTC
GVACAGNMTGTYCTB-
 A C G T A C G T A C G T A T G C A G C T C T A G C G A T A G T C A C G T A T G C A C G T A G T C A G T C A C G T A C G T A G T C
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTGTCTCTCCTTC--
NNAATTCTCGNTNAN
 A T G C A G C T C T A G C G A T A G T C A C G T A T G C A C G T A G T C A G T C A C G T A C G T A G T C A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CTGTCTCTCCTTC
---BNTGDCCTTG
 A T G C A G C T C T A G C G A T A G T C A C G T A T G C A C G T A G T C A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTGTCTCTCCTTC
GTTTCACTTCCG-
 A T G C A G C T C T A G C G A T A G T C A C G T A T G C A C G T A G T C A G T C A C G T A C G T A G T C
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T