Information for 24-TGCCCATGTCTGAGAT (Motif 44)

A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C T G A C G T A G T C A G C T C T A G C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T A G T C C T G A A C T G C G T A G T A C C G T A A G C T A C T G A C T G C T A G G T A C C G T A
p-value:1e-3
log p-value:-9.013e+00
Information Content per bp:1.916
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets16.5 +/- 6.5bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGCCCATGTCTGAGAT--
-NNTNNTGTCTGGNNTNG
 A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C T G A C G T A G T C A G C T C T A G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCCCATGTCTGAGAT
ATGCCCACC--------
 A C G T A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C T G A C G T A G T C A G C T C T A G C G T A A C T G C G T A A C G T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TGCCCATGTCTGAGAT
GGGTGTGCCCAAAAGG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C T G A C G T A G T C A G C T C T A G C G T A A C T G C G T A A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGCCCATGTCTGAGAT
TGACCATATATGGTCA
 A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C T G A C G T A G T C A G C T C T A G C G T A A C T G C G T A A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TGCCCATGTCTGAGAT-
-----NTTTCTNAGAAA
 A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C T G A C G T A G T C A G C T C T A G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TGCCCATGTCTGAGAT
GGGGCTYGKCTGGGA-
 A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C T G A C G T A G T C A G C T C T A G C G T A A C T G C G T A A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCATGTCTGAGAT
BNTGDCCTTG--------
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C T G A C G T A G T C A G C T C T A G C G T A A C T G C G T A A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:TGCCCATGTCTGAGAT
---VBSYGTCTGG---
 A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C T G A C G T A G T C A G C T C T A G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:TGCCCATGTCTGAGAT
-----TWGTCTGV---
 A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C T G A C G T A G T C A G C T C T A G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:TGCCCATGTCTGAGAT--
-------TGCTGTGATTT
 A C G T A C T G A G T C A G T C A G T C C T G A A C G T A C T G A C G T A G T C A G C T C T A G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T