Information for 16-CACATACAACABCACA (Motif 25)

A G T C C G T A G A T C C G T A G A C T C T G A A T G C G T C A C G T A G T A C C T G A A G T C A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G T C A G G A C T A C T G A C G T A C G T A T C G A G C T C T G A A C G T C T A G A C G T C T A G
p-value:1e-9
log p-value:-2.085e+01
Information Content per bp:1.787
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.7 +/- 21.5bp
Average Position of motif in Background50.9 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACATACAACABCACA--
AGTAAACAAAAAAGAACANN
 A C G T A C G T A G T C C G T A G A T C C G T A G A C T C T G A A T G C G T C A C G T A G T A C C T G A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.63
Offset:7
Orientation:forward strand
Alignment:CACATACAACABCACA---
-------NWAACCACADNN
 A G T C C G T A G A T C C G T A G A C T C T G A A T G C G T C A C G T A G T A C C T G A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:CACATACAACABCACA---
--------AAACCACAGAN
 A G T C C G T A G A T C C G T A G A C T C T G A A T G C G T C A C G T A G T A C C T G A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.60
Offset:8
Orientation:forward strand
Alignment:CACATACAACABCACA--
--------AAACCACANN
 A G T C C G T A G A T C C G T A G A C T C T G A A T G C G T C A C G T A G T A C C T G A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:CACATACAACABCACA--
--------AAACCACAGC
 A G T C C G T A G A T C C G T A G A C T C T G A A T G C G T C A C G T A G T A C C T G A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CACATACAACABCACA-
-------NAAACCACAG
 A G T C C G T A G A T C C G T A G A C T C T G A A T G C G T C A C G T A G T A C C T G A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACATACAACABCACA-
--CAAACAACAACACCT
 A G T C C G T A G A T C C G T A G A C T C T G A A T G C G T C A C G T A G T A C C T G A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CACATACAACABCACA-------
-------CGAAGCACACAAAATA
 A G T C C G T A G A T C C G T A G A C T C T G A A T G C G T C A C G T A G T A C C T G A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CACATACAACABCACA--
--------AAACCGCAAA
 A G T C C G T A G A T C C G T A G A C T C T G A A T G C G T C A C G T A G T A C C T G A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CACATACAACABCACA--
------SSAATCCACANN
 A G T C C G T A G A T C C G T A G A C T C T G A A T G C G T C A C G T A G T A C C T G A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C