Information for 5-GCATGGAGTTGGA (Motif 17)

A T C G A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C T G A T C G C T G A
Reverse Opposite:
A G C T A T G C A G T C G T C A C G T A A G T C A C G T G T A C A G T C C G T A A C G T A C T G A T G C
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 24.1bp
Average Position of motif in Background42.0 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCATGGAGTTGGA----
-TGCGGAGTGGGACTGG
 A T C G A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C T G A T C G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCATGGAGTTGGA
TTGAATGAAATTCGA
 A C G T A C G T A T C G A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C T G A T C G C T G A
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCATGGAGTTGGA
-NCTGGAATGC--
 A T C G A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C T G A T C G C T G A
A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCATGGAGTTGGA--
---GGGAATTGTAGT
 A T C G A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C T G A T C G C T G A A C G T A C G T
A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCATGGAGTTGGA--
NNNANTGCAGTGCNNTT
 A C G T A C G T A T C G A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C T G A T C G C T G A A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCATGGAGTTGGA----
-ATTGGACTTTGACCCC
 A T C G A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C T G A T C G C T G A A C G T A C G T A C G T A C G T
A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GCATGGAGTTGGA
ANTTNTACATGTANTTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C T G A T C G C T G A
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----GCATGGAGTTGGA
AATATACATGTAATATA-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C T G A T C G C T G A
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GCATGGAGTTGGA----
RTTKCADNNKRTTGCATNAN
 A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C T G A T C G C T G A A C G T A C G T A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GCATGGAGTTGGA
--BTBRAGTGSN-
 A T C G A G T C C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T A C T G A T C G C T G A
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T