Information for 4-CACACAVAGADAGTCT (Motif 9)

A G T C G T C A A G T C C G T A A T G C C G T A T A G C C G T A A T C G C G T A C G T A C G T A A C T G A G C T G T A C A C G T
Reverse Opposite:
C G T A A C T G C T G A A G T C C G A T G A C T A C G T A T G C A C G T A T C G C G A T A T C G C G A T C T A G A C G T A C T G
p-value:1e-10
log p-value:-2.377e+01
Information Content per bp:1.771
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.0 +/- 23.2bp
Average Position of motif in Background60.5 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CACACAVAGADAGTCT
--GAAAGTGAAAGT--
 A G T C G T C A A G T C C G T A A T G C C G T A T A G C C G T A A T C G C G T A C G T A C G T A A C T G A G C T G T A C A C G T
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.51
Offset:10
Orientation:forward strand
Alignment:CACACAVAGADAGTCT--
----------TWGTCTGV
 A G T C G T C A A G T C C G T A A T G C C G T A T A G C C G T A A T C G C G T A C G T A C G T A A C T G A G C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CACACAVAGADAGTCT
----AACAGGAAGT--
 A G T C G T C A A G T C C G T A A T G C C G T A T A G C C G T A A T C G C G T A C G T A C G T A A C T G A G C T G T A C A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CACACAVAGADAGTCT-
-AAACAGACAAAGGAAT
 A G T C G T C A A G T C C G T A A T G C C G T A T A G C C G T A A T C G C G T A C G T A C G T A A C T G A G C T G T A C A C G T A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CACACAVAGADAGTCT
-AGAAAGTGAAAGTGA
 A G T C G T C A A G T C C G T A A T G C C G T A T A G C C G T A A T C G C G T A C G T A C G T A A C T G A G C T G T A C A C G T
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:6
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CACACAVAGADAGTCT-
--YDGHTACAWTGTADC
 A G T C G T C A A G T C C G T A A T G C C G T A T A G C C G T A A T C G C G T A C G T A C G T A A C T G A G C T G T A C A C G T A C G T
A C G T A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:CACACAVAGADAGTCT
-------ACAAAG---
 A G T C G T C A A G T C C G T A A T G C C G T A T A G C C G T A A T C G C G T A C G T A C G T A A C T G A G C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CACACAVAGADAGTCT
-----AGAGGAAGTG-
 A G T C G T C A A G T C C G T A A T G C C G T A T A G C C G T A A T C G C G T A C G T A C G T A A C T G A G C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CACACAVAGADAGTCT-
--TWGHWACAWTGTWDC
 A G T C G T C A A G T C C G T A A T G C C G T A T A G C C G T A A T C G C G T A C G T A C G T A A C T G A G C T G T A C A C G T A C G T
A C G T A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.47
Offset:1
Orientation:forward strand
Alignment:CACACAVAGADAGTCT-----
-NNNNNBAGATAWYATCTVHN
 A G T C G T C A A G T C C G T A A T G C C G T A T A G C C G T A A T C G C G T A C G T A C G T A A C T G A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T