Information for 5-AGGGCTTCAAAGTGAC (Motif 20)

C G T A A C T G A C T G A C T G A G T C A G C T C G A T A G T C C G T A C T G A C G T A A C T G C A G T A C T G G T C A A G T C
Reverse Opposite:
A C T G C A G T A G T C G T C A A G T C A C G T A G C T A C G T A C T G C G T A C T G A A C T G A G T C A G T C A G T C A C G T
p-value:1e-7
log p-value:-1.686e+01
Information Content per bp:1.921
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.5 +/- 22.8bp
Average Position of motif in Background53.3 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGGGCTTCAAAGTGAC
-CGGTTTCAAA-----
 C G T A A C T G A C T G A C T G A G T C A G C T C G A T A G T C C G T A C T G A C G T A A C T G C A G T A C T G G T C A A G T C
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGGCTTCAAAGTGAC
-AAAGATCAAAGGAA-
 C G T A A C T G A C T G A C T G A G T C A G C T C G A T A G T C C G T A C T G A C G T A A C T G C A G T A C T G G T C A A G T C
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGGCTTCAAAGTGAC
---ACATCAAAGG---
 C G T A A C T G A C T G A C T G A G T C A G C T C G A T A G T C C G T A C T G A C G T A A C T G C A G T A C T G G T C A A G T C
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGGCTTCAAAGTGAC
---ACATCAAAGGNA-
 C G T A A C T G A C T G A C T G A G T C A G C T C G A T A G T C C G T A C T G A C G T A A C T G C A G T A C T G G T C A A G T C
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGGGCTTCAAAGTGAC
---ACWTCAAAGG---
 C G T A A C T G A C T G A C T G A G T C A G C T C G A T A G T C C G T A C T G A C G T A A C T G C A G T A C T G G T C A A G T C
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGGGCTTCAAAGTGAC
---GCTTCC-------
 C G T A A C T G A C T G A C T G A G T C A G C T C G A T A G T C C G T A C T G A C G T A A C T G C A G T A C T G G T C A A G T C
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AGGGCTTCAAAGTGAC--
---GHTACAWTGTADCHR
 C G T A A C T G A C T G A C T G A G T C A G C T C G A T A G T C C G T A C T G A C G T A A C T G C A G T A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGGGCTTCAAAGTGAC-
TATAGATCAAAGGAAAA
 C G T A A C T G A C T G A C T G A G T C A G C T C G A T A G T C C G T A C T G A C G T A A C T G C A G T A C T G G T C A A G T C A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AGGGCTTCAAAGTGAC---
-NAGTTTCABTHTGACTNW
 C G T A A C T G A C T G A C T G A G T C A G C T C G A T A G T C C G T A C T G A C G T A A C T G C A G T A C T G G T C A A G T C A C G T A C G T A C G T
A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AGGGCTTCAAAGTGAC--
---GHWACAWTGTWDCWA
 C G T A A C T G A C T G A C T G A G T C A G C T C G A T A G T C C G T A C T G A C G T A A C T G C A G T A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A