Information for 4-GTTTATGGTA (Motif 5)

A T C G A C G T A G C T A C G T C G T A A C G T A C T G C A T G A C G T C G T A
Reverse Opposite:
A C G T T G C A G A T C A G T C C G T A G C A T C G T A C T G A C G T A A T G C
p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.855
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif46.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets53.9 +/- 24.9bp
Average Position of motif in Background51.0 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX1/MA0878.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTTTATGGTA
TTTTATTGC-
 A T C G A C G T A G C T A C G T C G T A A C G T A C T G C A T G A C G T C G T A
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATGGTA
DGWTTTATGRCN
 A C G T A C G T A T C G A C G T A G C T A C G T C G T A A C G T A C T G C A T G A C G T C G T A
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTTTATGGTA-
TTTTATGGCTN
 A T C G A C G T A G C T A C G T C G T A A C G T A C T G C A T G A C G T C G T A A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATGGTA
NTTTTATGAC-
 A C G T A T C G A C G T A G C T A C G T C G T A A C G T A C T G C A T G A C G T C G T A
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GTTTATGGTA
TATTGTTTATT---
 A C G T A C G T A C G T A C G T A T C G A C G T A G C T A C G T C G T A A C G T A C T G C A T G A C G T C G T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATGGTA
TTTTTATTGG-
 A C G T A T C G A C G T A G C T A C G T C G T A A C G T A C T G C A T G A C G T C G T A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATGGTA
NTTTTATTGG-
 A C G T A T C G A C G T A G C T A C G T C G T A A C G T A C T G C A T G A C G T C G T A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATGGTA
NTGTTTAYATWW
 A C G T A C G T A T C G A C G T A G C T A C G T C G T A A C G T A C T G C A T G A C G T C G T A
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTTATGGTA
TTTTATTRGN
 A T C G A C G T A G C T A C G T C G T A A C G T A C T G C A T G A C G T C G T A
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATGGTA
TGTTTAC----
 A C G T A T C G A C G T A G C T A C G T C G T A A C G T A C T G C A T G A C G T C G T A
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T