Information for 8-TAACCAATCG (Motif 16)

C G A T T G C A C G T A A G T C A G T C C G T A C G T A A G C T G T A C A C T G
Reverse Opposite:
A G T C A C T G C T G A A C G T A C G T A C T G A C T G G C A T A C G T C G T A
p-value:1e-9
log p-value:-2.184e+01
Information Content per bp:1.861
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif40.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets53.5 +/- 24.6bp
Average Position of motif in Background53.4 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TAACCAATCG
ACTAGCCAATCA
 A C G T A C G T C G A T T G C A C G T A A G T C A G T C C G T A C G T A A G C T G T A C A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TAACCAATCG-
-AGCCAATCGG
 C G A T T G C A C G T A A G T C A G T C C G T A C G T A A G C T G T A C A C T G A C G T
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----TAACCAATCG-
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T C G A T T G C A C G T A A G T C A G T C C G T A C G T A A G C T G T A C A C T G A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAACCAATCG-------
TGGACCAATCAGCACTCT
 A C G T C G A T T G C A C G T A A G T C A G T C C G T A C G T A A G C T G T A C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAACCAATCG
-GAACAATGG
 C G A T T G C A C G T A A G T C A G T C C G T A C G T A A G C T G T A C A C T G
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAACCAATCG
GTAAACAAT--
 A C G T C G A T T G C A C G T A A G T C A G T C C G T A C G T A A G C T G T A C A C T G
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TAACCAATCG
GTTAACTAGN--
 A C G T A C G T C G A T T G C A C G T A A G T C A G T C C G T A C G T A A G C T G T A C A C T G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TAACCAATCG-
---CCAATCAA
 C G A T T G C A C G T A A G T C A G T C C G T A C G T A A G C T G T A C A C T G A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Foxq1/MA0040.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAACCAATCG
AATAAACAATN-
 A C G T A C G T C G A T T G C A C G T A A G T C A G T C C G T A C G T A A G C T G T A C A C T G
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TAACCAATCG
-NAACAAT--
 C G A T T G C A C G T A A G T C A G T C C G T A C G T A A G C T G T A C A C T G
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T