p-value: | 1e-6 |
log p-value: | -1.411e+01 |
Information Content per bp: | 1.871 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.37% |
Number of Background Sequences with motif | 0.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 49.0 +/- 22.1bp |
Average Position of motif in Background | 82.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0170.1_Sox17_2/Jaspar
Match Rank: | 1 |
Score: | 0.77 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTRTGAATRTRST- NTTNTATGAATGTGNNC |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTRTGAATRTRST --ATGMATATDC- |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTRTGAATRTRST NNTNTCATGAATGT--- |
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TBX21/MA0690.1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTRTGAATRTRST AAGGTGTGAA------ |
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EOMES/MA0800.1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTRTGAATRTRST AAGGTGTGAAAAT--- |
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TBR1/MA0802.1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTRTGAATRTRST AGGTGTGAAA----- |
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PB0013.1_Eomes_1/Jaspar
Match Rank: | 7 |
Score: | 0.65 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GTRTGAATRTRST GAAAAGGTGTGAAAATT-- |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 8 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTRTGAATRTRST --ATGAATATTC- |
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PB0171.1_Sox18_2/Jaspar
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTRTGAATRTRST-- NNNNTGAATTCANNNC |
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TBX2/MA0688.1/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTRTGAATRTRST AAGGTGTGAAA----- |
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