Information for 3-AGAGAAAGAGAATTAT (Motif 4)

C G T A A C T G C G T A A C T G C G T A C T G A C G T A T A C G C G T A C A T G C T G A C G T A A C G T A C G T T C G A A C G T
Reverse Opposite:
T G C A A C G T G T C A T C G A A C G T A G C T G T A C A C G T A G T C A C G T A G C T A C G T T G A C A C G T A G T C A C G T
p-value:1e-17
log p-value:-3.939e+01
Information Content per bp:1.765
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.1 +/- 28.1bp
Average Position of motif in Background53.9 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAAAGAGAATTAT
GAAAGTGAAAGT-------
 A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A C T G A C G T A T A C G C G T A C A T G C T G A C G T A A C G T A C G T T C G A A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGAGAAAGAGAATTAT
AGAAAGTGAAAGTGA-----
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A C T G A C G T A T A C G C G T A C A T G C T G A C G T A A C G T A C G T T C G A A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGAGAAAGAGAATTAT
AAACAGACAAAGGAAT----
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A C T G A C G T A T A C G C G T A C A T G C T G A C G T A A C G T A C G T T C G A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAAAGAGAATTAT
ANAGATAAGAA-------
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A C T G A C G T A T A C G C G T A C A T G C T G A C G T A A C G T A C G T T C G A A C G T
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGAGAAAGAGAATTAT
AGATAAGA--------
 C G T A A C T G C G T A A C T G C G T A C T G A C G T A T A C G C G T A C A T G C T G A C G T A A C G T A C G T T C G A A C G T
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGAGAAAGAGAATTAT
AGATAASR--------
 C G T A A C T G C G T A A C T G C G T A C T G A C G T A T A C G C G T A C A T G C T G A C G T A A C G T A C G T T C G A A C G T
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAAAGAGAATTAT
NAGATAAGNN-------
 A C G T C G T A A C T G C G T A A C T G C G T A C T G A C G T A T A C G C G T A C A T G C T G A C G T A A C G T A C G T T C G A A C G T
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGAGAAAGAGAATTAT
AAATAAACA-------
 C G T A A C T G C G T A A C T G C G T A C T G A C G T A T A C G C G T A C A T G C T G A C G T A A C G T A C G T T C G A A C G T
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAAAGAGAATTAT
NCAGATAAGAANNN----
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A C T G A C G T A T A C G C G T A C A T G C T G A C G T A A C G T A C G T T C G A A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAAAGAGAATTAT
NNGAGATAAGA--------
 A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A C T G A C G T A T A C G C G T A C A T G C T G A C G T A A C G T A C G T T C G A A C G T
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T