Information for 11-TTGGTTAATC (Motif 9)

A G C T A C G T A C T G A C T G A C G T A G C T C G T A T C G A C G A T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T C T G A C G T A A G T C A G T C C G T A C T G A
p-value:1e-14
log p-value:-3.410e+01
Information Content per bp:1.901
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.2 +/- 27.2bp
Average Position of motif in Background49.1 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTGGTTAATC----
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A G C T A C G T A C T G A C T G A C G T A G C T C G T A T C G A C G A T A G T C A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTGGTTAATC
ACTAGTTAAC-
 A C G T A G C T A C G T A C T G A C T G A C G T A G C T C G T A T C G A C G A T A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTGGTTAATC----
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T A G C T A C G T A C T G A C T G A C G T A G C T C G T A T C G A C G A T A G T C A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PH0015.1_Crx/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTGGTTAATC-------
-AGGCTAATCCCCAANG
 A G C T A C G T A C T G A C T G A C G T A G C T C G T A T C G A C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTGGTTAATC-------
ATAGTTAATCCCCCNNA
 A G C T A C G T A C T G A C T G A C G T A G C T C G T A T C G A C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TTGGTTAATC--
----TTAATCCT
 A G C T A C G T A C T G A C T G A C G T A G C T C G T A T C G A C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTGGTTAATC-------
NTTGTTAATCCCTCTNN
 A G C T A C G T A C T G A C T G A C G T A G C T C G T A T C G A C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTGGTTAATC---
---NYTAATCCYB
 A G C T A C G T A C T G A C T G A C G T A G C T C G T A T C G A C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGGTTAATC------
GNNNATTAATCCCTNCN
 A C G T A G C T A C G T A C T G A C T G A C G T A G C T C G T A T C G A C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTGGTTAATC--
----TTAATCCG
 A G C T A C G T A C T G A C T G A C G T A G C T C G T A T C G A C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G