Information for 10-CCTCAKTGGC (Motif 8)

A G T C A T G C A C G T T G A C G C T A A C G T C G A T A C T G A C T G A G T C
Reverse Opposite:
T C A G A G T C A G T C G C T A T G C A C G A T A C T G C G T A T A C G A C T G
p-value:1e-15
log p-value:-3.509e+01
Information Content per bp:1.721
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.03%
Number of Background Sequences with motif508.8
Percentage of Background Sequences with motif1.95%
Average Position of motif in Targets55.3 +/- 26.3bp
Average Position of motif in Background50.8 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCTCAKTGGC----
--TGATTGGCTANN
 A G T C A T G C A C G T T G A C G C T A A C G T C G A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCTCAKTGGC-
-CCGATTGGCT
 A G T C A T G C A C G T T G A C G C T A A C G T C G A T A C T G A C T G A G T C A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCTCAKTGGC------
-CTGATTGGTCNATTT
 A G T C A T G C A C G T T G A C G C T A A C G T C G A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCTCAKTGGC-
-----TTGGCA
 A G T C A T G C A C G T T G A C G C T A A C G T C G A T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCTCAKTGGC---
----NTTGGCANN
 A G T C A T G C A C G T T G A C G C T A A C G T C G A T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTCAKTGGC
ACWTCAAAGG-
 A C G T A G T C A T G C A C G T T G A C G C T A A C G T C G A T A C T G A C T G A G T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCTCAKTGGC---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C G T T G A C G C T A A C G T C G A T A C T G A C T G A G T C A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCTCAKTGGC-
TGCCCTNAGGGCA
 A C G T A C G T A G T C A T G C A C G T T G A C G C T A A C G T C G A T A C T G A C T G A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTCAKTGGC-
CTTGAGTGGCT
 A G T C A T G C A C G T T G A C G C T A A C G T C G A T A C T G A C T G A G T C A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCTCAKTGGC
GTCCCCAGGGGA
 A C G T A C G T A G T C A T G C A C G T T G A C G C T A A C G T C G A T A C T G A C T G A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A