Information for 5-BCGCRGDGCMTKC (Motif 5)

A T C G A T G C T A C G A G T C C T A G C T A G C A G T A C T G T A G C G T A C A G C T A C T G T A G C
Reverse Opposite:
A T C G T G A C C T G A C A T G A T C G G T A C G T C A G A T C G A T C C T A G A T G C A T C G T A G C
p-value:1e-27
log p-value:-6.272e+01
Information Content per bp:1.609
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif12.30%
Number of Background Sequences with motif871.5
Percentage of Background Sequences with motif3.34%
Average Position of motif in Targets52.9 +/- 25.0bp
Average Position of motif in Background49.4 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---BCGCRGDGCMTKC
GCCGCGCAGTGCGT--
 A C G T A C G T A C G T A T C G A T G C T A C G A G T C C T A G C T A G C A G T A C T G T A G C G T A C A G C T A C T G T A G C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--BCGCRGDGCMTKC
GGGGCCGAGGCCTG-
 A C G T A C G T A T C G A T G C T A C G A G T C C T A G C T A G C A G T A C T G T A G C G T A C A G C T A C T G T A G C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--BCGCRGDGCMTKC--
AATCGCACTGCATTCCG
 A C G T A C G T A T C G A T G C T A C G A G T C C T A G C T A G C A G T A C T G T A G C G T A C A G C T A C T G T A G C A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:BCGCRGDGCMTKC--
---CTGCGCATGCGC
 A T C G A T G C T A C G A G T C C T A G C T A G C A G T A C T G T A G C G T A C A G C T A C T G T A G C A C G T A C G T
A C G T A C G T A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:BCGCRGDGCMTKC
---CNAGGCCT--
 A T C G A T G C T A C G A G T C C T A G C T A G C A G T A C T G T A G C G T A C A G C T A C T G T A G C
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:BCGCRGDGCMTKC
---CTAGGCCT--
 A T C G A T G C T A C G A G T C C T A G C T A G C A G T A C T G T A G C G T A C A G C T A C T G T A G C
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:BCGCRGDGCMTKC
---CGGAGC----
 A T C G A T G C T A C G A G T C C T A G C T A G C A G T A C T G T A G C G T A C A G C T A C T G T A G C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:BCGCRGDGCMTKC
--GCAGTGATTT-
 A T C G A T G C T A C G A G T C C T A G C T A G C A G T A C T G T A G C G T A C A G C T A C T G T A G C
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--BCGCRGDGCMTKC
GTCCCCAGGGGA---
 A C G T A C G T A T C G A T G C T A C G A G T C C T A G C T A G C A G T A C T G T A G C G T A C A G C T A C T G T A G C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--BCGCRGDGCMTKC
GGGGGCGGGGCC---
 A C G T A C G T A T C G A T G C T A C G A G T C C T A G C T A G C A G T A C T G T A G C G T A C A G C T A C T G T A G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T