Information for 3-TCCCAGCATGCAC (Motif 2)

C G A T A G T C A G T C A G T C C T G A T A C G G T A C C T G A A C G T A T C G A G T C G C T A G A T C
Reverse Opposite:
C A T G C G A T A C T G A T G C G T C A G A C T C A T G A T G C G A C T A C T G A C T G A C T G C G T A
p-value:1e-87
log p-value:-2.015e+02
Information Content per bp:1.743
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif9.41%
Number of Background Sequences with motif70.0
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets49.0 +/- 32.7bp
Average Position of motif in Background46.9 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGCATGCAC
ATTTCCCAGVAKSCY-
 A C G T A C G T A C G T C G A T A G T C A G T C A G T C C T G A T A C G G T A C C T G A A C G T A T C G A G T C G C T A G A T C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TCCCAGCATGCAC--
TACCCACAATGCATTG
 A C G T C G A T A G T C A G T C A G T C C T G A T A C G G T A C C T G A A C G T A T C G A G T C G C T A G A T C A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.68
Offset:-9
Orientation:forward strand
Alignment:---------TCCCAGCATGCAC
AACTACAATTCCCAGAATGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C A G T C A G T C C T G A T A C G G T A C C T G A A C G T A T C G A G T C G C T A G A T C
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGCATGCAC
CCACACAGCAGGAGA
 A C G T A C G T C G A T A G T C A G T C A G T C C T G A T A C G G T A C C T G A A C G T A T C G A G T C G C T A G A T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:5
Score:0.65
Offset:-9
Orientation:forward strand
Alignment:---------TCCCAGCATGCAC
RACTACAACTCCCAGVAKGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C A G T C A G T C C T G A T A C G G T A C C T G A A C G T A T C G A G T C G C T A G A T C
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCCCAGCATGCAC
DCTCAGCAGG---
 C G A T A G T C A G T C A G T C C T G A T A C G G T A C C T G A A C G T A T C G A G T C G C T A G A T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGCATGCAC
GAGCACAGCAGGACA
 A C G T A C G T C G A T A G T C A G T C A G T C C T G A T A C G G T A C C T G A A C G T A T C G A G T C G C T A G A T C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGCATGCAC
CCACACAGCAGGAGA
 A C G T A C G T C G A T A G T C A G T C A G T C C T G A T A C G G T A C C T G A A C G T A T C G A G T C G C T A G A T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCCCAGCATGCAC
TTTCCCAGAAN----
 A C G T A C G T C G A T A G T C A G T C A G T C C T G A T A C G G T A C C T G A A C G T A T C G A G T C G C T A G A T C
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGCATGCAC
HTTTCCCASG------
 A C G T A C G T A C G T C G A T A G T C A G T C A G T C C T G A T A C G G T A C C T G A A C G T A T C G A G T C G C T A G A T C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T