Information for 7-GAMGCYSASAGSRAAG (Motif 14)

A C T G C G T A T G C A C T A G A G T C G A C T A T G C C G T A A T G C G T C A A T C G A T C G C T A G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C A T G C A T G C A C G T A T C G A C G T A T C G C T G A A C T G A G T C A C G T A C G T A G T C
p-value:1e-10
log p-value:-2.343e+01
Information Content per bp:1.821
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.6 +/- 20.1bp
Average Position of motif in Background54.3 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:1
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GAMGCYSASAGSRAAG---
-------ACATCAAAGGNA
 A C T G C G T A T G C A C T A G A G T C G A C T A T G C C G T A A T G C G T C A A T C G A T C G C T A G C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAMGCYSASAGSRAAG
NGAAGC-----------
 A C G T A C T G C G T A T G C A C T A G A G T C G A C T A T G C C G T A A T G C G T C A A T C G A T C G C T A G C G T A C G T A A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GAMGCYSASAGSRAAG---
-----AAAGATCAAAGGAA
 A C T G C G T A T G C A C T A G A G T C G A C T A T G C C G T A A T G C G T C A A T C G A T C G C T A G C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:4
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GAMGCYSASAGSRAAG-
-------ACVAGGAAGT
 A C T G C G T A T G C A C T A G A G T C G A C T A T G C C G T A A T G C G T C A A T C G A T C G C T A G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GAMGCYSASAGSRAAG
------NACAGGAAAT
 A C T G C G T A T G C A C T A G A G T C G A C T A T G C C G T A A T G C G T C A A T C G A T C G C T A G C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GAMGCYSASAGSRAAG-
-------ACWTCAAAGG
 A C T G C G T A T G C A C T A G A G T C G A C T A T G C C G T A A T G C G T C A A T C G A T C G C T A G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GAMGCYSASAGSRAAG-
-------ACATCAAAGG
 A C T G C G T A T G C A C T A G A G T C G A C T A T G C C G T A A T G C G T C A A T C G A T C G C T A G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GAMGCYSASAGSRAAG-----
----NNNAGATCAAAGGANNN
 A C T G C G T A T G C A C T A G A G T C G A C T A T G C C G T A A T G C G T C A A T C G A T C G C T A G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GAMGCYSASAGSRAAG
------CACAGN----
 A C T G C G T A T G C A C T A G A G T C G A C T A T G C C G T A A T G C G T C A A T C G A T C G C T A G C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GAMGCYSASAGSRAAG
------NACAGGAAAT
 A C T G C G T A T G C A C T A G A G T C G A C T A T G C C G T A A T G C G T C A A T C G A T C G C T A G C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T