Information for 11-TGTACHTGGCTGC (Motif 11)

A G C T A C T G A C G T C G T A A T G C G A T C C G A T A C T G A C T G A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G A G T C G T A C C G T A C A T G A T C G C G A T C G T A G T A C C T G A
p-value:1e-12
log p-value:-2.985e+01
Information Content per bp:1.816
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.5 +/- 21.8bp
Average Position of motif in Background38.2 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TGTACHTGGCTGC
-------NGCTN-
 A G C T A C T G A C G T C G T A A T G C G A T C C G A T A C T G A C T G A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGTACHTGGCTGC
-----TWGTCTGV
 A G C T A C T G A C G T C G T A A T G C G A T C C G A T A C T G A C T G A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGTACHTGGCTGC
GTCATGCHTGRCTGS
 A C G T A C G T A G C T A C T G A C G T C G T A A T G C G A T C C G A T A C T G A C T G A G T C A C G T A C T G A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TGTACHTGGCTGC-
--------GCTGTG
 A G C T A C T G A C G T C G T A A T G C G A T C C G A T A C T G A C T G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TGTACHTGGCTGC-
--------GCTTCC
 A G C T A C T G A C G T C G T A A T G C G A T C C G A T A C T G A C T G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGTACHTGGCTGC
-CAAGATGGCGGC
 A G C T A C T G A C G T C G T A A T G C G A T C C G A T A C T G A C T G A G T C A C G T A C T G A G T C
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TGTACHTGGCTGC-
--------GCTCCG
 A G C T A C T G A C G T C G T A A T G C G A T C C G A T A C T G A C T G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGTACHTGGCTGC
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G C T A C T G A C G T C G T A A T G C G A T C C G A T A C T G A C T G A G T C A C G T A C T G A G T C
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGTACHTGGCTGC
-CAAGATGGCGGC
 A G C T A C T G A C G T C G T A A T G C G A T C C G A T A C T G A C T G A G T C A C G T A C T G A G T C
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGTACHTGGCTGC
-NNACTTGCCTT-
 A G C T A C T G A C G T C G T A A T G C G A T C C G A T A C T G A C T G A G T C A C G T A C T G A G T C
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T