Information for 16-AAAGNAVACARAG (Motif 26)

C G T A T C G A T C G A C T A G T G C A T G C A T C G A C G T A T G A C G C T A T C G A C G T A T A C G
Reverse Opposite:
A T G C G C A T A G C T C A G T A C T G G C A T A G C T A C G T A C G T G A T C A G C T A G C T C G A T
p-value:1e-13
log p-value:-3.135e+01
Information Content per bp:1.596
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets53.4 +/- 26.1bp
Average Position of motif in Background68.6 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AAAGNAVACARAG
CAAAAGTAAACAAAG
 A C G T A C G T C G T A T C G A T C G A C T A G T G C A T G C A T C G A C G T A T G A C G C T A T C G A C G T A T A C G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAAGNAVACARAG
AAAGTAAACA---
 C G T A T C G A T C G A C T A G T G C A T G C A T C G A C G T A T G A C G C T A T C G A C G T A T A C G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAAGNAVACARAG
AAAGTAAACA---
 C G T A T C G A T C G A C T A G T G C A T G C A T C G A C G T A T G A C G C T A T C G A C G T A T A C G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAAGNAVACARAG
TAAGTAAACAAA-
 C G T A T C G A T C G A C T A G T G C A T G C A T C G A C G T A T G A C G C T A T C G A C G T A T A C G
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AAAGNAVACARAG
WAAGTAAAYA---
 C G T A T C G A T C G A C T A G T G C A T G C A T C G A C G T A T G A C G C T A T C G A C G T A T A C G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAAGNAVACARAG--
AAAAAGTAAACAAACAC
 A C G T A C G T C G T A T C G A T C G A C T A G T G C A T G C A T C G A C G T A T G A C G C T A T C G A C G T A T A C G A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAAGNAVACARAG--
AAAAAGTAAACAAACAC
 A C G T A C G T C G T A T C G A T C G A C T A G T G C A T G C A T C G A C G T A T G A C G C T A T C G A C G T A T A C G A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAAGNAVACARAG--
AAAAAGTAAACAAAGAC
 A C G T A C G T C G T A T C G A T C G A C T A G T G C A T G C A T C G A C G T A T G A C G C T A T C G A C G T A T A C G A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAAGNAVACARAG
-AAGTAAACAAA-
 C G T A T C G A T C G A C T A G T G C A T G C A T C G A C G T A T G A C G C T A T C G A C G T A T A C G
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAAGNAVACARAG-
CAAAGTAAACANNNN
 A C G T C G T A T C G A T C G A C T A G T G C A T G C A T C G A C G T A T G A C G C T A T C G A C G T A T A C G A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A