Information for 19-GGATCTATAT (Motif 39)

C A T G A C T G C G T A G C A T A G T C C G A T C G T A C G A T T C G A A G C T
Reverse Opposite:
C T G A A G C T C G T A C G A T C G T A C T A G C G T A C G A T G T A C G T A C
p-value:1e-6
log p-value:-1.530e+01
Information Content per bp:1.761
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif26.5
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets46.4 +/- 30.6bp
Average Position of motif in Background56.7 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGATCTATAT
DGATCRATAN
 C A T G A C T G C G T A G C A T A G T C C G A T C G T A C G A T T C G A A G C T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGATCTATAT
TAATCGATAA
 C A T G A C T G C G T A G C A T A G T C C G A T C G T A C G A T T C G A A G C T
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CUX2/MA0755.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGATCTATAT
TAATCGATAA
 C A T G A C T G C G T A G C A T A G T C C G A T C G T A C G A T T C G A A G C T
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

PB0198.1_Zfp128_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGATCTATAT---
TGTATATATATACC
 A C G T C A T G A C T G C G T A G C A T A G T C C G A T C G T A C G A T T C G A A G C T A C G T A C G T A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGATCTATAT
HNRAATCAAT--
 A C G T A C G T C A T G A C T G C G T A G C A T A G T C C G A T C G T A C G A T T C G A A G C T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGATCTATAT---
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A C G T C A T G A C T G C G T A G C A T A G T C C G A T C G T A C G A T T C G A A G C T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGATCTATAT---
NNAGATNVNWATCTN
 A C G T A C G T C A T G A C T G C G T A G C A T A G T C C G A T C G T A C G A T T C G A A G C T A C G T A C G T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGATCTATAT
YSTTATCT----
 A C G T A C G T C A T G A C T G C G T A G C A T A G T C C G A T C G T A C G A T T C G A A G C T
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGATCTATAT
NGGATTAN---
 A C G T C A T G A C T G C G T A G C A T A G T C C G A T C G T A C G A T T C G A A G C T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGATCTATAT
CCTTTGATCTTT--
 A C G T A C G T A C G T A C G T C A T G A C T G C G T A G C A T A G T C C G A T C G T A C G A T T C G A A G C T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T