Information for 17-AAAAAGGCGG (Motif 37)

C G T A C G T A G T C A T C G A C T G A A C T G A C T G G T A C A C T G C T A G
Reverse Opposite:
A G T C A G T C A C T G A G T C A G T C G A C T A C G T A C G T A C G T A C G T
p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.859
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets41.2 +/- 24.7bp
Average Position of motif in Background48.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAAAAGGCGG-
CAAGATGGCGGC
 A C G T C G T A C G T A G T C A T C G A C T G A A C T G A C T G G T A C A C T G C T A G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAAAAGGCGG-
CAAGATGGCGGC
 A C G T C G T A C G T A G T C A T C G A C T G A A C T G A C T G G T A C A C T G C T A G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAAAAGGCGG--
-TAATGGCGGNC
 C G T A C G T A G T C A T C G A C T G A A C T G A C T G G T A C A C T G C T A G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAGGCGG------
NAGANTGGCGGGGNGNA
 A C G T C G T A C G T A G T C A T C G A C T G A A C T G A C T G G T A C A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAAAGGCGG------
AAAATGGCGCCATTTT
 C G T A C G T A G T C A T C G A C T G A A C T G A C T G G T A C A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAAAGGCGG-------
AAAAATGGCGCCATTTTT
 A C G T C G T A C G T A G T C A T C G A C T G A A C T G A C T G G T A C A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAAAAGGCGG---
GGGNGGGGGCGGGGC
 A C G T A C G T C G T A C G T A G T C A T C G A C T G A A C T G A C T G G T A C A C T G C T A G A C G T A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAAAGGCGG-----
-AGGGGGCGGGGCTG
 C G T A C G T A G T C A T C G A C T G A A C T G A C T G G T A C A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SPIC/MA0687.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAAAGGCGG--
AAAAAGAGGAAGTA
 A C G T A C G T C G T A C G T A G T C A T C G A C T G A A C T G A C T G G T A C A C T G C T A G A C G T A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAGGCGG
AACAAAGG---
 A C G T C G T A C G T A G T C A T C G A C T G A A C T G A C T G G T A C A C T G C T A G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T