Information for 16-AGCTTATATG (Motif 30)

C G T A A C T G G T A C C G A T C G A T G T C A A G C T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C T G A C A G T C G T A C G T A A C T G A G T C A C G T
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.9 +/- 16.4bp
Average Position of motif in Background64.8 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRF/MA0083.3/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGCTTATATG----
TGNCCATATATGGTCA
 A C G T A C G T C G T A A C T G G T A C C G A T C G A T G T C A A G C T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGCTTATATG
CAAGCTT-----
 A C G T A C G T C G T A A C T G G T A C C G A T C G A T G T C A A G C T C G T A A C G T A C T G
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCTTATATG---
-CCTTTTATAGNC
 C G T A A C T G G T A C C G A T C G A T G T C A A G C T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0184.1_Tbp_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCTTATATG--
GNNCGCTTAAATCGG
 A C G T A C G T A C G T C G T A A C T G G T A C C G A T C G A T G T C A A G C T C G T A A C G T A C T G A C G T A C G T
C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCTTATATG---
-CCATATATGGNA
 C G T A A C T G G T A C C G A T C G A T G T C A A G C T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGCTTATATG----
---TTTTATGGCTN
 C G T A A C T G G T A C C G A T C G A T G T C A A G C T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGCTTATATG--
---TTTTATTGC
 C G T A A C T G G T A C C G A T C G A T G T C A A G C T C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGCTTATATG--
--NTTTTATGAC
 C G T A A C T G G T A C C G A T C G A T G T C A A G C T C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

PB0078.1_Srf_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCTTATATG---
TNCCATATATGGNA
 A C G T C G T A A C T G G T A C C G A T C G A T G T C A A G C T C G T A A C G T A C T G A C G T A C G T A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCTTATATG
NCCTTATCTG
 C G T A A C T G G T A C C G A T C G A T G T C A A G C T C G T A A C G T A C T G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G