Information for 1-ACTACAAHTCCCAGMR (Motif 3)

G T C A A G T C A G C T C G T A A G T C T C G A G C T A G A T C G A C T G T A C A G T C A G T C C G T A T A C G T G C A T C G A
Reverse Opposite:
A G C T A C G T A T G C G C A T A C T G A C T G A C T G C G T A C T A G C G A T A G C T A C T G G C A T T C G A A C T G A C G T
p-value:1e-19
log p-value:-4.521e+01
Information Content per bp:1.721
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.26%
Number of Background Sequences with motif130.4
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets53.6 +/- 22.5bp
Average Position of motif in Background47.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:ACTACAAHTCCCAGMR
ACTACAATTCCC----
 G T C A A G T C A G C T C G T A A G T C T C G A G C T A G A T C G A C T G T A C A G T C A G T C C G T A T A C G T G C A T C G A
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-ACTACAAHTCCCAGMR---
RACTACAACTCCCAGVAKGC
 A C G T G T C A A G T C A G C T C G T A A G T C T C G A G C T A G A T C G A C T G T A C A G T C A G T C C G T A T A C G T G C A T C G A A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-ACTACAAHTCCCAGMR---
AACTACAATTCCCAGAATGC
 A C G T G T C A A G T C A G C T C G T A A G T C T C G A G C T A G A T C G A C T G T A C A G T C A G T C C G T A T A C G T G C A T C G A A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACTACAAHTCCCAGMR
ATTTACGACAAATAGC----
 A C G T A C G T A C G T A C G T G T C A A G T C A G C T C G T A A G T C T C G A G C T A G A T C G A C T G T A C A G T C A G T C C G T A T A C G T G C A T C G A
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACTACAAHTCCCAGMR----
-----ATTTCCCAGVAKSCY
 G T C A A G T C A G C T C G T A A G T C T C G A G C T A G A T C G A C T G T A C A G T C A G T C C G T A T A C G T G C A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACTACAAHTCCCAGMR
NWAACCACADNN-------
 A C G T A C G T A C G T G T C A A G T C A G C T C G T A A G T C T C G A G C T A G A T C G A C T G T A C A G T C A G T C C G T A T A C G T G C A T C G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACTACAAHTCCCAGMR
AAACCACAGC--------
 A C G T A C G T G T C A A G T C A G C T C G T A A G T C T C G A G C T A G A T C G A C T G T A C A G T C A G T C C G T A T A C G T G C A T C G A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ACTACAAHTCCCAGMR
-----HTTTCCCASG-
 G T C A A G T C A G C T C G T A A G T C T C G A G C T A G A T C G A C T G T A C A G T C A G T C C G T A T A C G T G C A T C G A
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACTACAAHTCCCAGMR
NAAACCACAG---------
 A C G T A C G T A C G T G T C A A G T C A G C T C G T A A G T C T C G A G C T A G A T C G A C T G T A C A G T C A G T C C G T A T A C G T G C A T C G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACTACAAHTCCCAGMR
AAACCACANN--------
 A C G T A C G T G T C A A G T C A G C T C G T A A G T C T C G A G C T A G A T C G A C T G T A C A G T C A G T C C G T A T A C G T G C A T C G A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T