Information for 17-KCTGCCYTCRGTR (Motif 24)

A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T G T A C C T A G A C T G A C G T C T A G
Reverse Opposite:
A G T C C G T A A G T C A G T C A C T G C G T A C T G A A C T G A T C G A G T C C G T A A C T G G T A C
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.5 +/- 18.2bp
Average Position of motif in Background46.1 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:KCTGCCYTCRGTR
-CTGCCCGCA---
 A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T G T A C C T A G A C T G A C G T C T A G
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:KCTGCCYTCRGTR
-CTGACCTTTG--
 A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T G T A C C T A G A C T G A C G T C T A G
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:KCTGCCYTCRGTR--
--TGCCCTNAGGGCA
 A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T G T A C C T A G A C T G A C G T C T A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:KCTGCCYTCRGTR--
-NTGCCCTAGGGCAA
 A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T G T A C C T A G A C T G A C G T C T A G A C G T A C G T
A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KCTGCCYTCRGTR--
--TGCCCTGAGGGCA
 A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T G T A C C T A G A C T G A C G T C T A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:KCTGCCYTCRGTR-
--TGCCCTNGGGCA
 A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T G T A C C T A G A C T G A C G T C T A G A C G T
A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:KCTGCCYTCRGTR-
--TGCCCTNGGGCA
 A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T G T A C C T A G A C T G A C G T C T A G A C G T
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:KCTGCCYTCRGTR--
--TGCCCTGAGGGCA
 A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T G T A C C T A G A C T G A C G T C T A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KCTGCCYTCRGTR
-ATGCCCTGAGGC
 A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T G T A C C T A G A C T G A C G T C T A G
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:KCTGCCYTCRGTR
--TGACCTYA---
 A C T G A G T C A C G T A C T G A T G C A G T C A G C T A C G T G T A C C T A G A C T G A C G T C T A G
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T