Information for 8-GCGATTGAGG (Motif 14)

A C T G A G T C A C T G G C T A A C G T A G C T A C T G C G T A C T A G A C T G
Reverse Opposite:
A G T C A G T C A C G T T G A C T C G A G T C A C G A T A G T C A C T G G T A C
p-value:1e-11
log p-value:-2.698e+01
Information Content per bp:1.852
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif33.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets61.3 +/- 28.7bp
Average Position of motif in Background58.3 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCGATTGAGG---
NNANTGATTGATNNNN
 A C G T A C G T A C G T A C T G A G T C A C T G G C T A A C G T A G C T A C T G C G T A C T A G A C T G A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCGATTGAGG---
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C T G A G T C A C T G G C T A A C G T A G C T A C T G C G T A C T A G A C T G A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Hmx1/MA0896.1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCGATTGAGG---
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G G C T A A C G T A G C T A C T G C G T A C T A G A C T G A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCGATTGAGG---
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G G C T A A C G T A G C T A C T G C G T A C T A G A C T G A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGATTGAGG
CNGTGATTTN--
 A C G T A C G T A C T G A G T C A C T G G C T A A C G T A G C T A C T G C G T A C T A G A C T G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCGATTGAGG-
-TGATTGATGA
 A C T G A G T C A C T G G C T A A C G T A G C T A C T G C G T A C T A G A C T G A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCGATTGAGG--
-TGATTTATGGC
 A C T G A G T C A C T G G C T A A C G T A G C T A C T G C G T A C T A G A C T G A C G T A C G T
A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGATTGAGG-
TTTGATTGATGN
 A C G T A C T G A G T C A C T G G C T A A C G T A G C T A C T G C G T A C T A G A C T G A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCGATTGAGG--
ATGATKGATGRC
 A C T G A G T C A C T G G C T A A C G T A G C T A C T G C G T A C T A G A C T G A C G T A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCGATTGAGG---
-TGATTTATGGCC
 A C T G A G T C A C T G G C T A A C G T A G C T A C T G C G T A C T A G A C T G A C G T A C G T A C G T
A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C