Information for 3-CABCAGGCTCAGAGTA (Motif 5)

G T A C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A C T G C G T A A C T G A C G T G C T A
Reverse Opposite:
C G A T G T C A A G T C A C G T G T A C A C G T A C T G C T G A C T A G T G A C A G T C C G A T A C T G T G A C C G A T A C T G
p-value:1e-12
log p-value:-2.783e+01
Information Content per bp:1.767
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 24.5bp
Average Position of motif in Background65.2 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CABCAGGCTCAGAGTA--
---AGAGTCCAAAGTCCA
 G T A C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A C T G C G T A A C T G A C G T G C T A A C G T A C G T
A C G T A C G T A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CABCAGGCTCAGAGTA--
--CANAGNNCAAAGTCCA
 G T A C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A C T G C G T A A C T G A C G T G C T A A C G T A C G T
A C G T A C G T G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CABCAGGCTCAGAGTA------
--YCAGGCWCAGTACCAGGCTC
 G T A C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A C T G C G T A A C T G A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CABCAGGCTCAGAGTA--
---AGGGGTCAGAGGTCA
 G T A C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A C T G C G T A A C T G A C G T G C T A A C G T A C G T
A C G T A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CABCAGGCTCAGAGTA
--CCAGGAACAG----
 G T A C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A C T G C G T A A C T G A C G T G C T A
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CABCAGGCTCAGAGTA----
----GGGGTCAAAGTCCAAT
 G T A C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A C T G C G T A A C T G A C G T G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Sox11/MA0869.1/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CABCAGGCTCAGAGTA
-AACAATTTCAGTGTT
 G T A C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A C T G C G T A A C T G A C G T G C T A
A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CABCAGGCTCAGAGTA
CAGCTGNT--------
 G T A C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A C T G C G T A A C T G A C G T G C T A
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CABCAGGCTCAGAGTA--
----GGGGTCAAAGGTCA
 G T A C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A C T G C G T A A C T G A C G T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CABCAGGCTCAGAGTA--
----GAGGTCAAAGGTCA
 G T A C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A G C T A G T C C G T A A C T G C G T A A C T G A C G T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A