Information for 13-WRGKSCATGGACT (Motif 31)

C G A T C T G A A C T G A C G T A T G C A G T C C G T A A C G T A C T G A C T G G T C A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C A G T C C G T A A C G T A C T G A T C G G T C A A G T C A G C T C G T A
p-value:1e-6
log p-value:-1.449e+01
Information Content per bp:1.878
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 29.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:WRGKSCATGGACT------
---NNATTGGACTTTNGNN
 C G A T C T G A A C T G A C G T A T G C A G T C C G T A A C G T A C T G A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:WRGKSCATGGACT
-AGGTCAAGGTCA
 C G A T C T G A A C T G A C G T A T G C A G T C C G T A A C G T A C T G A C T G G T C A A G T C A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---WRGKSCATGGACT
NANAAGGGCGTGGTC-
 A C G T A C G T A C G T C G A T C T G A A C T G A C G T A T G C A G T C C G T A A C G T A C T G A C T G G T C A A G T C A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:WRGKSCATGGACT
-AGGTCAAGGTCA
 C G A T C T G A A C T G A C G T A T G C A G T C C G T A A C G T A C T G A C T G G T C A A G T C A C G T
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:WRGKSCATGGACT--
-AGGTCANTGACCTN
 C G A T C T G A A C T G A C G T A T G C A G T C C G T A A C G T A C T G A C T G G T C A A G T C A C G T A C G T A C G T
A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:WRGKSCATGGACT--
-----NCTGGAATGC
 C G A T C T G A A C T G A C G T A T G C A G T C C G T A A C G T A C T G A C T G G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:WRGKSCATGGACT--
AAGTTCAAGGTCAGC
 C G A T C T G A A C T G A C G T A T G C A G T C C G T A A C G T A C T G A C T G G T C A A G T C A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:WRGKSCATGGACT-
GGGGCCGAGGCCTG
 C G A T C T G A A C T G A C G T A T G C A G T C C G T A A C G T A C T G A C T G G T C A A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:WRGKSCATGGACT
---NTCAAGGTCA
 C G A T C T G A A C T G A C G T A T G C A G T C C G T A A C G T A C T G A C T G G T C A A G T C A C G T
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-WRGKSCATGGACT---
AATATACATGTAATATA
 A C G T C G A T C T G A A C T G A C G T A T G C A G T C C G T A A C G T A C T G A C T G G T C A A G T C A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T