Information for 2-ACACGTGTAT (Motif 17)

C G T A A G T C C G T A A G T C C A T G A C G T A C T G A G C T C G T A A C G T
Reverse Opposite:
G T C A A C G T C T G A T A G C C G T A G T A C C T A G A C G T C T A G A C G T
p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.856
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif41.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets46.5 +/- 23.1bp
Average Position of motif in Background45.2 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGTAT
AACACGTGTT-
 A C G T C G T A A G T C C G T A A G T C C A T G A C G T A C T G A G C T C G T A A C G T
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-ACACGTGTAT
NACACGTGCN-
 A C G T C G T A A G T C C G T A A G T C C A T G A C G T A C T G A G C T C G T A A C G T
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:ACACGTGTAT
-CACGTGBN-
 C G T A A G T C C G T A A G T C C A T G A C G T A C T G A G C T C G T A A C G T
A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ACACGTGTAT
ACACGTGC--
 C G T A A G T C C G T A A G T C C A T G A C G T A C T G A G C T C G T A A C G T
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ACACGTGTAT
-CACGTG---
 C G T A A G T C C G T A A G T C C A T G A C G T A C T G A G C T C G T A A C G T
A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGTAT
GHCACGTG---
 A C G T C G T A A G T C C G T A A G T C C A T G A C G T A C T G A G C T C G T A A C G T
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGTAT
GNCACGTG---
 A C G T C G T A A G T C C G T A A G T C C A T G A C G T A C T G A G C T C G T A A C G T
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ACACGTGTAT
ACACGTGGC-
 C G T A A G T C C G T A A G T C C A T G A C G T A C T G A G C T C G T A A C G T
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T

MNT/MA0825.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACACGTGTAT
ACCACGTGCC-
 A C G T C G T A A G T C C G T A A G T C C A T G A C G T A C T G A G C T C G T A A C G T
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ACACGTGTAT
TCACGTGC--
 C G T A A G T C C G T A A G T C C A T G A C G T A C T G A G C T C G T A A C G T
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T