Information for 5-CCATTGAATTAGC (Motif 16)

G T A C G A T C G C T A A C G T G C A T C T A G C T G A G C T A G A C T G A C T G C T A C T A G T G A C
Reverse Opposite:
A C T G G A T C C G A T C T G A C T G A C A G T G A C T G A T C C G T A T G C A C G A T C T A G C A T G
p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.663
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif157.5
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets53.3 +/- 28.5bp
Average Position of motif in Background52.9 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CCATTGAATTAGC-
NNNTATTGAATTGNNN
 A C G T A C G T G T A C G A T C G C T A A C G T G C A T C T A G C T G A G C T A G A C T G A C T G C T A C T A G T G A C A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCATTGAATTAGC
NANTTCATTGAATTA--
 A C G T A C G T A C G T A C G T G T A C G A T C G C T A A C G T G C A T C T A G C T G A G C T A G A C T G A C T G C T A C T A G T G A C
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCATTGAATTAGC
CCTTTGAWGT---
 G T A C G A T C G C T A A C G T G C A T C T A G C T G A G C T A G A C T G A C T G C T A C T A G T G A C
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T

PH0128.1_Otp/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCATTGAATTAGC----
CNNATTAATTAATTNNN
 G T A C G A T C G C T A A C G T G C A T C T A G C T G A G C T A G A C T G A C T G C T A C T A G T G A C A C G T A C G T A C G T A C G T
G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G

PH0176.1_Vsx1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCATTGAATTAGC----
CGAGTTAATTAATAATT
 G T A C G A T C G C T A A C G T G C A T C T A G C T G A G C T A G A C T G A C T G C T A C T A G T G A C A C G T A C G T A C G T A C G T
G T A C T A C G G T C A C T A G G A C T G A C T G T C A C G T A G A C T A C G T C T G A C T G A G A C T C T G A T G C A G C A T A G C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCATTGAATTAGC
CCTTTGATGT---
 G T A C G A T C G C T A A C G T G C A T C T A G C T G A G C T A G A C T G A C T G C T A C T A G T G A C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

PH0160.1_Shox2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCATTGAATTAGC---
NNNAATTAATTAANNNG
 A C G T G T A C G A T C G C T A A C G T G C A T C T A G C T G A G C T A G A C T G A C T G C T A C T A G T G A C A C G T A C G T A C G T
T A G C G T C A A G T C T C G A G T C A A G C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A T G C C A T G G T A C A T C G

ALX3/MA0634.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCATTGAATTAGC
---TCTAATTAAA
 G T A C G A T C G C T A A C G T G C A T C T A G C T G A G C T A G A C T G A C T G C T A C T A G T G A C
A C G T A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

PH0069.1_Hoxc4/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCATTGAATTAGC----
CGAATTAATTAACAATA
 G T A C G A T C G C T A A C G T G C A T C T A G C T G A G C T A G A C T G A C T G C T A C T A G T G A C A C G T A C G T A C G T A C G T
T G A C T C A G G T C A C T G A G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A A G T C G C T A T G C A G C A T G T C A

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCATTGAATTAGC
--ADBTAATTAR-
 G T A C G A T C G C T A A C G T G C A T C T A G C T G A G C T A G A C T G A C T G C T A C T A G T G A C
A C G T A C G T C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G A C G T