p-value: | 1e-7 |
log p-value: | -1.640e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.46% |
Number of Background Sequences with motif | 2.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 61.5 +/- 9.4bp |
Average Position of motif in Background | 20.9 +/- 3.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RHOXF1/MA0719.1/Jaspar
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CCACGGGGATCAG -----NGGATTAN |
|
|
|
PH0139.1_Pitx3/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCACGGGGATCAG----- --AGGGGGATTAGCTGCC |
|
|
|
PH0015.1_Crx/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCACGGGGATCAG--- CGTTGGGGATTAGCCT |
|
|
|
MZF1/MA0056.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCACGGGGATCAG ---TGGGGA---- |
|
|
|
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCACGGGGATCAG NNCCACGTGG----- |
|
|
|
Crx/MA0467.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCACGGGGATCAG --AAGAGGATTAG |
|
|
|
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCACGGGGATCAG NNCCACGTGG----- |
|
|
|
PB0059.1_Six6_1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCACGGGGATCAG---- AATAGGGTATCATATAT |
|
|
|
GSC/MA0648.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCACGGGGATCAG- ----NNGGATTAGN |
|
|
|
Mycn/MA0104.3/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCACGGGGATCAG GCCACGTG------ |
|
|
|