Information for 8-AAGGTCTGTGTCT (Motif 15)

C T G A C G T A A C T G A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C T G C A A G T C C G T A A C T G C G T A A T G C G T A C A C G T A G C T
p-value:1e-8
log p-value:-1.930e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 15.8bp
Average Position of motif in Background41.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGGTCTGTGTCT----
-ANTCCTTTGTCTNNNN
 C T G A C G T A A C T G A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAGGTCTGTGTCT-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T C T G A C G T A A C T G A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGGTCTGTGTCT-
---GTCTGTGGTTT
 C T G A C G T A A C T G A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTCTGTGTCT
TCAAGGTCAN-----
 A C G T A C G T C T G A C G T A A C T G A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGGTCTGTGTCT
VBSYGTCTGG----
 A C G T C T G A C G T A A C T G A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AAGGTCTGTGTCT
----GCTGTG---
 C T G A C G T A A C T G A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AAGGTCTGTGTCT--
-------CTGTCTGG
 C T G A C G T A A C T G A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCTGTGTCT
TCAAGGTCAT-----
 A C G T A C G T C T G A C G T A A C T G A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAGGTCTGTGTCT
NTCAAGGTCA------
 A C G T A C G T A C G T C T G A C G T A A C T G A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAGGTCTGTGTCT
CAGGTAAGTAT--
 C T G A C G T A A C T G A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T