Information for 3-AGGCCTAGGC (Motif 9)

T C G A A T C G A C T G A G T C A G T C A C G T C G T A A C T G A C T G A T G C
Reverse Opposite:
A T C G T G A C A G T C C G A T T G C A C T A G A C T G A G T C T A G C A G C T
p-value:1e-12
log p-value:-2.814e+01
Information Content per bp:1.841
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif108.4
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets49.2 +/- 27.4bp
Average Position of motif in Background50.5 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCTAGGC---
CAGGCCNNGGCCNN
 A C G T T C G A A T C G A C T G A G T C A G T C A C G T C G T A A C T G A C T G A T G C A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.83
Offset:0
Orientation:forward strand
Alignment:AGGCCTAGGC
AGGCCTAG--
 T C G A A T C G A C T G A G T C A G T C A C G T C G T A A C T G A C T G A T G C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.81
Offset:0
Orientation:forward strand
Alignment:AGGCCTAGGC
AGGCCTNG--
 T C G A A T C G A C T G A G T C A G T C A C G T C G T A A C T G A C T G A T G C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGGCCTAGGC--
ACATGCCCGGGCAT
 A C G T A C G T T C G A A T C G A C T G A G T C A G T C A C G T C G T A A C T G A C T G A T G C A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGCCTAGGC-
AGCCTCAGGCA
 T C G A A T C G A C T G A G T C A G T C A C G T C G T A A C T G A C T G A T G C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGCCTAGGC-
AGCCTCAGGCA
 T C G A A T C G A C T G A G T C A G T C A C G T C G T A A C T G A C T G A T G C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGCCTAGGC-
CGCCTCAGGCA
 T C G A A T C G A C T G A G T C A G T C A C G T C G T A A C T G A C T G A T G C A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGCCTAGGC-
ACGCCCACGCA
 T C G A A T C G A C T G A G T C A G T C A C G T C G T A A C T G A C T G A T G C A C G T
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCCTAGGC-
-TGCCCAGNHW
 T C G A A T C G A C T G A G T C A G T C A C G T C G T A A C T G A C T G A T G C A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGCCTAGGC-
-TGTCTAGACG
 T C G A A T C G A C T G A G T C A G T C A C G T C G T A A C T G A C T G A T G C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G