Information for 2-CCCCCGCCWTCTT (Motif 3)

A G T C T A G C A T G C A G T C G A T C T C A G A G T C A G T C G C T A A G C T A G T C A C G T A G C T
Reverse Opposite:
C T G A C G T A C T A G C T G A C G A T A C T G A C T G A G T C C T A G C T A G A T C G A T C G T C A G
p-value:1e-13
log p-value:-3.115e+01
Information Content per bp:1.725
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif118.9
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets53.9 +/- 25.8bp
Average Position of motif in Background53.5 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:CCCCCGCCWTCTT-
--GCCGCCATCTTG
 A G T C T A G C A T G C A G T C G A T C T C A G A G T C A G T C G C T A A G C T A G T C A C G T A G C T A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:CCCCCGCCWTCTT-
--GCNGCCATCTTG
 A G T C T A G C A T G C A G T C G A T C T C A G A G T C A G T C G C T A A G C T A G T C A C G T A G C T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCCCCGCCWTCTT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A G T C T A G C A T G C A G T C G A T C T C A G A G T C A G T C G C T A A G C T A G T C A C G T A G C T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCCCCGCCWTCTT
-GTCCGCCATTA-
 A G T C T A G C A T G C A G T C G A T C T C A G A G T C A G T C G C T A A G C T A G T C A C G T A G C T
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCCCCGCCWTCTT--
GCCCCGCCCCCTCCC
 A G T C T A G C A T G C A G T C G A T C T C A G A G T C A G T C G C T A A G C T A G T C A C G T A G C T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCCCGCCWTCTT
GCCCCGCCCCC--
 A G T C T A G C A T G C A G T C G A T C T C A G A G T C A G T C G C T A A G C T A G T C A C G T A G C T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCCCCGCCWTCTT
CCCCCCCC-----
 A G T C T A G C A T G C A G T C G A T C T C A G A G T C A G T C G C T A A G C T A G T C A C G T A G C T
A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCGCCWTCTT
NAGCCCCGCCCCCN-
 A C G T A C G T A G T C T A G C A T G C A G T C G A T C T C A G A G T C A G T C G C T A A G C T A G T C A C G T A G C T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCCCGCCWTCTT
CTATCCCCGCCCTATT
 A C G T A C G T A C G T A G T C T A G C A T G C A G T C G A T C T C A G A G T C A G T C G C T A A G C T A G T C A C G T A G C T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCCCCGCCWTCTT--
-----GCCATCTGTT
 A G T C T A G C A T G C A G T C G A T C T C A G A G T C A G T C G C T A A G C T A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T