Information for 5-CCTGGGTAAA (Motif 12)

G T A C A G T C C A G T C T A G T C A G T C A G A G C T G T C A G T C A T G C A
Reverse Opposite:
A C G T A C G T A C G T T C G A A G T C A G T C A G T C G T C A T C A G C A T G
p-value:1e-10
log p-value:-2.402e+01
Information Content per bp:1.690
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.51%
Number of Background Sequences with motif854.3
Percentage of Background Sequences with motif1.83%
Average Position of motif in Targets46.7 +/- 24.9bp
Average Position of motif in Background49.2 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCTGGGTAAA
CSTGGGAAAD
G T A C A G T C C A G T C T A G T C A G T C A G A G C T G T C A G T C A T G C A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCTGGGTAAA--
NCTAAGTAAACA
G T A C A G T C C A G T C T A G T C A G T C A G A G C T G T C A G T C A T G C A A C G T A C G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCTGGGTAAA----
NNNVCTGWGYAAACASN
A C G T A C G T A C G T G T A C A G T C C A G T C T A G T C A G T C A G A G C T G T C A G T C A T G C A A C G T A C G T A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCTGGGTAAA-----
NCWRWGTAAACANSV
G T A C A G T C C A G T C T A G T C A G T C A G A G C T G T C A G T C A T G C A A C G T A C G T A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCTGGGTAAA
WDNCTGGGCA--
A C G T A C G T G T A C A G T C C A G T C T A G T C A G T C A G A G C T G T C A G T C A T G C A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCTGGGTAAA------
-CAAAGTAAACANNNN
G T A C A G T C C A G T C T A G T C A G T C A G A G C T G T C A G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCTGGGTAAA--
--WAAGTAAAYA
G T A C A G T C C A G T C T A G T C A G T C A G A G C T G T C A G T C A T G C A A C G T A C G T
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCTGGGTAAA----
--TATGTAAACANG
G T A C A G T C C A G T C T A G T C A G T C A G A G C T G T C A G T C A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCTGGGTAAA--
-----GTAAACA
G T A C A G T C C A G T C T A G T C A G T C A G A G C T G T C A G T C A T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTGGGTAAA--
--AAAGTAAACA
G T A C A G T C C A G T C T A G T C A G T C A G A G C T G T C A G T C A T G C A A C G T A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A