Information for 16-TTCTGTCACG (Motif 41)

A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G C G T A A G T C C G T A A C T G C G T A C G T A
p-value:1e-5
log p-value:-1.214e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 24.1bp
Average Position of motif in Background45.1 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:TTCTGTCACG-
---AGTCACGC
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTCTGTCACG
-CCTGTCAA-
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C T G
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTCTGTCACG
-GCTGTCAA-
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C T G
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TTCTGTCACG
--NTGTCAN-
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C T G
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTCTGTCACG
VGCTGWCAVB
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C T G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTCTGTCACG-
TGTCTGDCACCT
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTCTGTCACG---
---GGTCACGTGC
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTCTGTCACG---
---GGTCACGTGG
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTCTGTCACG-
CTGTCTGTCACCT
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTCTGTCACG-
---TGTCANYT
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T