Information for 13-TGYTTTGTTGTTT (Motif 29)

A C G T A C T G A G C T A C G T A G C T A C G T A C T G A C G T C A G T A C T G A C G T A C G T C G A T
Reverse Opposite:
C G T A G T C A G T C A T G A C G T C A G T C A G T A C G T C A T C G A G T C A T C G A G T A C G T C A
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.733
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.71%
Number of Background Sequences with motif250.7
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets52.9 +/- 22.0bp
Average Position of motif in Background52.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGYTTTGTTGTTT-
NNNTGTTGTTGTTNG
 A C G T A C G T A C T G A G C T A C G T A G C T A C G T A C T G A C G T C A G T A C T G A C G T A C G T C G A T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGYTTTGTTGTTT---
-NTNTTGTTGTTTGTN
 A C G T A C T G A G C T A C G T A G C T A C G T A C T G A C G T C A G T A C T G A C G T A C G T C G A T A C G T A C G T A C G T
A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGYTTTGTTGTTT---
-GTNTTGTTGTGANNT
 A C G T A C T G A G C T A C G T A G C T A C G T A C T G A C G T C A G T A C T G A C G T A C G T C G A T A C G T A C G T A C G T
A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGYTTTGTTGTTT
---NNTGTGGTTT
 A C G T A C T G A G C T A C G T A G C T A C G T A C T G A C G T C A G T A C T G A C G T A C G T C G A T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGYTTTGTTGTTT--
NCNTTTGTTATTTNN
 A C G T A C T G A G C T A C G T A G C T A C G T A C T G A C G T C A G T A C T G A C G T A C G T C G A T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGYTTTGTTGTTT
NNCTTTGTTTTGNTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T A G C T A C G T A C T G A C G T C A G T A C T G A C G T A C G T C G A T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGYTTTGTTGTTT-
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T A G C T A C G T A C T G A C G T C A G T A C T G A C G T A C G T C G A T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGYTTTGTTGTTT---
NNTGTTCTTTTTTGTTTACT
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T A G C T A C G T A C T G A C G T C A G T A C T G A C G T A C G T C G A T A C G T A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGYTTTGTTGTTT---
NNTTTTGTTTTGATNT
 A C G T A C T G A G C T A C G T A G C T A C G T A C T G A C G T C A G T A C T G A C G T A C G T C G A T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGYTTTGTTGTTT-
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T A G C T A C G T A C T G A C G T C A G T A C T G A C G T A C G T C G A T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T