Information for 9-ATTCMTTWMTYAG (Motif 19)

C G T A A C G T C G A T A G T C G T A C A C G T A C G T C G A T G T C A A C G T A G C T C G T A A C T G
Reverse Opposite:
A G T C A C G T C T G A C G T A A C G T C G T A C G T A C G T A A C T G C T A G C G T A C G T A A C G T
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 23.8bp
Average Position of motif in Background56.9 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0146.1_Pou3f1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATTCMTTWMTYAG--
NANTTAATTAATTANNN
 A C G T A C G T C G T A A C G T C G A T A G T C G T A C A C G T A C G T C G A T G T C A A C G T A G C T C G T A A C T G A C G T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTCMTTWMTYAG
NNCATTCATTCATNNN
 A C G T A C G T A C G T C G T A A C G T C G A T A G T C G T A C A C G T A C G T C G A T G T C A A C G T A G C T C G T A A C T G
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTCMTTWMTYAG-
GACNTCATTAATAANN
 A C G T A C G T C G T A A C G T C G A T A G T C G T A C A C G T A C G T C G A T G T C A A C G T A G C T C G T A A C T G A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATTCMTTWMTYAG
AATCAATTCAATAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T A G T C G T A C A C G T A C G T C G A T G T C A A C G T A G C T C G T A A C T G
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T A C G T

Hoxd8/MA0910.1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ATTCMTTWMTYAG
NAGCCATTAATTANTTA-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T A G T C G T A C A C G T A C G T C G A T G T C A A C G T A G C T C G T A A C T G
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A A C G T

PH0080.1_Hoxd8/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ATTCMTTWMTYAG
NAGCCATTAATTANTTA-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T A G T C G T A C A C G T A C G T C G A T G T C A A C G T A G C T C G T A A C T G
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATTCMTTWMTYAG
--TCATCAATCA-
 C G T A A C G T C G A T A G T C G T A C A C G T A C G T C G A T G T C A A C G T A G C T C G T A A C T G
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

PH0132.1_Pax6/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATTCMTTWMTYAG
GNNAATTAATTAATCA-
 A C G T A C G T A C G T A C G T C G T A A C G T C G A T A G T C G T A C A C G T A C G T C G A T G T C A A C G T A G C T C G T A A C T G
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A A C G T

mix-a/MA0621.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATTCMTTWMTYAG-
---AATTAATTAGT
 C G T A A C G T C G A T A G T C G T A C A C G T A C G T C G A T G T C A A C G T A G C T C G T A A C T G A C G T
A C G T A C G T A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0159.1_Rhox6/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATTCMTTWMTYAG-----
-TGCCTTAATTAATGCTC
 C G T A A C G T C G A T A G T C G T A C A C G T A C G T C G A T G T C A A C G T A G C T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C A G G T A C T G A C G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A G C T A C T G A T G C C G A T G A T C