Information for 6-CATGAACACAAAG (Motif 15)

G T A C G T C A A C G T C T A G C G T A C G T A A T G C C G T A A G T C C G T A C T G A C T G A A C T G
Reverse Opposite:
G T A C A G C T A G C T A C G T C T A G A C G T A T C G A C G T A C G T A G T C G T C A A C G T A C T G
p-value:1e-10
log p-value:-2.305e+01
Information Content per bp:1.808
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif40.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets49.0 +/- 26.8bp
Average Position of motif in Background52.9 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CATGAACACAAAG-
----AAAACAAAGG
 G T A C G T C A A C G T C T A G C G T A C G T A A T G C C G T A A G T C C G T A C T G A C T G A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATGAACACAAAG-
AAAGTAAACAAAAATT
 A C G T A C G T G T A C G T C A A C G T C T A G C G T A C G T A A T G C C G T A A G T C C G T A C T G A C T G A A C T G A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CATGAACACAAAG----
-AAACAGACAAAGGAAT
 G T A C G T C A A C G T C T A G C G T A C G T A A T G C C G T A A G T C C G T A C T G A C T G A A C T G A C G T A C G T A C G T A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CATGAACACAAAG-
----AAAACAATGG
 G T A C G T C A A C G T C T A G C G T A C G T A A T G C C G T A A G T C C G T A C T G A C T G A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CATGAACACAAAG
-GTAAACA-----
 G T A C G T C A A C G T C T A G C G T A C G T A A T G C C G T A A G T C C G T A C T G A C T G A A C T G
A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CATGAACACAAAG-
ATTTGCATACAATGG
 A C G T G T A C G T C A A C G T C T A G C G T A C G T A A T G C C G T A A G T C C G T A C T G A C T G A A C T G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:CATGAACACAAAG
-------ACAAAG
 G T A C G T C A A C G T C T A G C G T A C G T A A T G C C G T A A G T C C G T A C T G A C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CATGAACACAAAG
AAATAAACA-----
 A C G T G T A C G T C A A C G T C T A G C G T A C G T A A T G C C G T A A G T C C G T A C T G A C T G A A C T G
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CATGAACACAAAG----
--CTCACACAATGGCGC
 G T A C G T C A A C G T C T A G C G T A C G T A A T G C C G T A A G T C C G T A C T G A C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATGAACACAAAG--
CGAAGCACACAAAATA
 A C G T G T A C G T C A A C G T C T A G C G T A C G T A A T G C C G T A A G T C C G T A C T G A C T G A A C T G A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A