Information for 5-GCAAGCGTTCTTT (Motif 14)

A C T G A G T C C G T A C G T A C A T G A G T C A T C G A C G T A G C T G T A C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G C T G A C G T A A T G C A C T G G A T C C G A T A C G T A C T G A G T C
p-value:1e-10
log p-value:-2.314e+01
Information Content per bp:1.929
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.0 +/- 18.2bp
Average Position of motif in Background54.3 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCAAGCGTTCTTT
-CAAGCTT-----
 A C T G A G T C C G T A C G T A C A T G A G T C A T C G A C G T A G C T G T A C A C G T A C G T A C G T
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCAAGCGTTCTTT-
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C A T G A G T C A T C G A C G T A G C T G T A C A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCAAGCGTTCTTT-----
---AGNGTTCTAATGANN
 A C T G A G T C C G T A C G T A C A T G A G T C A T C G A C G T A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCAAGCGTTCTTT-
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C A T G A G T C A T C G A C G T A G C T G T A C A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCAAGCGTTCTTT
-TAAGGCGTCTTG
 A C T G A G T C C G T A C G T A C A T G A G T C A T C G A C G T A G C T G T A C A C G T A C G T A C G T
A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GCAAGCGTTCTTT
AAGGCAAGTGT-----
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C A T G A G T C A T C G A C G T A G C T G T A C A C G T A C G T A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GCAAGCGTTCTTT
TGCGCAGGCGC-----
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C A T G A G T C A T C G A C G T A G C T G T A C A C G T A C G T A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GCAAGCGTTCTTT------
-----TTTTTTTTCNNGTN
 A C T G A G T C C G T A C G T A C A T G A G T C A T C G A C G T A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GCAAGCGTTCTTT--
---AGGVNCCTTTGT
 A C T G A G T C C G T A C G T A C A T G A G T C A T C G A C G T A G C T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GCAAGCGTTCTTT
GGCACGCGTC----
 A C G T A C T G A G T C C G T A C G T A C A T G A G T C A T C G A C G T A G C T G T A C A C G T A C G T A C G T
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T A C G T